Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1767 ATGTCTTCGTCGAAAGAGGCAGACCCGAGCCTGGGTTACCTGACTCGCAAGGACACGGAGGTGAAGCTTCCGCGTCCAACGAGGGTGAAGAACAAAACCCCCGCTCCCATTCAAATCACCGCCGAGCAGATTCTCCGCGAGGCACGCGAGCGTCAAGAGGCCGAGATCCGCCCTCCCAAGCAGAAAATCACTGACTCCACCGAGCTCGGCGAGTACCGTCTCCGCAAGCGCAAGGAGTTCGAAGACCTAATCCGCCGCGTTCGATGGAACATCGGCGTCTGGATCAAGTACGCTCAGTGGGAGGAATCGCAGAAGGACTTCAAACGCGCGCGTTCCGTCTGGGAGAGAGCGTTGGAGGTCGATTACAAGAATCACACCCTATGGCTCAAGTACGCCGAGGTGGAGATGAAGAACAAGTTCATCAACCACGCGCGCAACGTTTGGGACCGCGCCGTTACACTTCTGCCTAGGGTGGATCAGTTATGGTACAAGTACATTCACATGGAGGAGATGCTTGGCAATGTCGCCGGCGCCAGGCAGGTTTTCGAGCGGTGGATGAAGTGGACGCCGGATCAGCAGGGATGGCTCTCTTACATCAAGTTTGAATTGAGGTACAATGAAATTGAGCGCGCCAGAGGGATTTTCGAAAGGTTTGTCGAGTGCCATCCCAGGGTTGGGGCTTGGATACGCTATGCCAAGTTTGAGATGAAGAATGGCGAGGTTCCAAGGTCGAGGAACGTGTACGAGAGAGCGGTGGATAGGCTCTCTGATGATGAGGAAGCGGAGCAGTTATTTGTTGCTTTTGCTGAGTTTGAGGAAAGGTGTAAGGAGACTGAGCGTGCAAGGGCTATATATAAGTTTGCCCTTGATCATATTCCCAAGGGAAGGGCTGAGGATTTGTATCGCAAGTTTGTGGCGTTTGAGAAGCAGTATGGGGACAGGGAAGGGATTGAGGATGCTATTGTTGGGAAGAGAAGGTTTCAGTATGAGGATGAAGTCAAGAAGAATCCGTTGAATTATGATTCCTGGTTTGACTACATAAGGTTGGAAGAAAGTGTGGGGGATAAGGAGAAAATCAGGGAGGTTTATGAGAGGGCTATAGCCAATGTTCCTCCGGCTGAGGAGAAGCGCTACTGGCAGCGCTATATCTATTTGTGGGAGTGTCTCAATCAGATACCTCATCAAAAGTTCTCGTTTGCAAAGATATGGCTTCTAGCAGCCCAGTTTGAAATACGTCAGCTGAATCTCAAGGCTGCTCGTCAAATATTAGGAAATGCCATTGGAAAGGCTCCTAAAGACAAGATTTTTAAGAAGTATATAGAGATAGAACTGCAGCTTGGTAATATAGATCGATGCAGAAAACTGTATGAAAAATATCTGGAGTGGTCACCCGAAAATTGTTATGCTTGGAGCAAGTATGCAGAACTGGAGAGATCTTTATCTGAGACTGATCGAGCCAGAGCAATATTTGAGCTTGCAATCGCTCAACCAGCTTTGGACATGCCTGAGCTGTTGTGGAAGGCATACATTGACTTTGAGACCGCTGAGGGTGAATTTGAGAGAGCAAGAGCACTCTATGAAAGGCTTCTTGATAGAACAAAGCACTTGAAGGTATGGATAAGCTATGCGGAATTTGAGGCAACAGCTATGGATATGGACAGTTTAGACTTAACAGAAGATGAACAAAAGCAATGCATTCAGCATGCTAGAAGGGTGTTTGAGAAAGCTCTTAACTACTTCAGGTCATCAGCTCCAGATTTGAAAGAAGAAAGGGCAATGCTATTGGAGAAATGGCTCAACATGGAGGCTACTTCTGGAGAACTGGGTGATGTTAGCTTAGTCCAGTCTAAACTTCCCAAGAAGCTCAAGAAGAGAAGGCATGTTGCCACCGAAGATGGTTCTACTAGAATTGAAGAATTCATCGACTATTTATTCCCTGAGGAAAGCCAGACAACCAATCTCAAGATCTTGGAAGCTGCTTACAAATGGAAGAAGCAAAAATTGTCTTCTGCTGATGATTAA 2022 0.4768 MSSSKEADPSLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPKQKITDSTELGEYRLRKRKEFEDLIRRVRWNIGVWIKYAQWEESQKDFKRARSVWERALEVDYKNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQVFERWMKWTPDQQGWLSYIKFELRYNEIERARGIFERFVECHPRVGAWIRYAKFEMKNGEVPRSRNVYERAVDRLSDDEEAEQLFVAFAEFEERCKETERARAIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVKKNPLNYDSWFDYIRLEESVGDKEKIREVYERAIANVPPAEEKRYWQRYIYLWECLNQIPHQKFSFAKIWLLAAQFEIRQLNLKAARQILGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYEKYLEWSPENCYAWSKYAELERSLSETDRARAIFELAIAQPALDMPELLWKAYIDFETAEGEFERARALYERLLDRTKHLKVWISYAEFEATAMDMDSLDLTEDEQKQCIQHARRVFEKALNYFRSSAPDLKEERAMLLEKWLNMEATSGELGDVSLVQSKLPKKLKKRRHVATEDGSTRIEEFIDYLFPEESQTTNLKILEAAYKWKKQKLSSADD 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1767 673 SUPERFAMILY TPR-like 81 205 IPR011990 GO:0005515
Aed11g1767 673 Coils Coil 512 532 - -
Aed11g1767 673 Gene3D Tetratricopeptide repeat domain 501 607 IPR011990 GO:0005515
Aed11g1767 673 Gene3D Tetratricopeptide repeat domain 323 500 IPR011990 GO:0005515
Aed11g1767 673 PANTHER - 22 671 - -
Aed11g1767 673 MobiDBLite consensus disorder prediction 11 27 - -
Aed11g1767 673 SMART hat_new_1 481 515 IPR003107 GO:0006396
Aed11g1767 673 SMART hat_new_1 206 237 IPR003107 GO:0006396
Aed11g1767 673 SMART hat_new_1 276 310 IPR003107 GO:0006396
Aed11g1767 673 SMART hat_new_1 71 103 IPR003107 GO:0006396
Aed11g1767 673 SMART hat_new_1 105 137 IPR003107 GO:0006396
Aed11g1767 673 SMART hat_new_1 239 274 IPR003107 GO:0006396
Aed11g1767 673 SMART hat_new_1 414 445 IPR003107 GO:0006396
Aed11g1767 673 SMART hat_new_1 517 548 IPR003107 GO:0006396
Aed11g1767 673 SMART hat_new_1 320 352 IPR003107 GO:0006396
Aed11g1767 673 SMART hat_new_1 354 388 IPR003107 GO:0006396
Aed11g1767 673 SMART hat_new_1 447 479 IPR003107 GO:0006396
Aed11g1767 673 SMART hat_new_1 139 171 IPR003107 GO:0006396
Aed11g1767 673 SMART hat_new_1 173 204 IPR003107 GO:0006396
Aed11g1767 673 SMART hat_new_1 564 597 IPR003107 GO:0006396
Aed11g1767 673 Pfam HAT (Half-A-TPR) repeat 207 235 IPR003107 GO:0006396
Aed11g1767 673 SUPERFAMILY TPR-like 268 501 IPR011990 GO:0005515
Aed11g1767 673 MobiDBLite consensus disorder prediction 1 36 - -
Aed11g1767 673 Gene3D Tetratricopeptide repeat domain 36 190 IPR011990 GO:0005515
Aed11g1767 673 Gene3D Tetratricopeptide repeat domain 191 322 IPR011990 GO:0005515
Aed11g1767 673 Pfam Tetratricopeptide repeat 444 466 IPR019734 GO:0005515
Aed11g1767 673 PANTHER PRE-MRNA SPLICING FACTOR 22 671 IPR045075 GO:0000398
Aed11g1767 673 SUPERFAMILY TPR-like 504 605 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1767 Aed-Chr11 21120326 21125400 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1767 K12869 - gmx:100811745 1310.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1767 11 21120326 21125400 Aed11g1767 11 21120326 21125400 ECH