Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1759 ATGACAGAGGCTGAGACGGATGATGTTGTTACGAAGTGTAACTTCATGTTCGCATTCAACAACGTCAATTTCTCAGACCGAATTCTCAACATTGAGGTTATACCCGACCACCCTCATTTCATCCCCAGCCAATCCCATTCCCTTTCTCTTTCTCCAAATCGTAAGAGACGCAGACACACTCTTATCAAAGATGCAGAGGAAGCCGTGGCAATCACTCAGGCGTCACCTTCAGGTGATGAAGTTTCTCATGGAAATGATTCATCATTGGGCATGAGTTGCTCAACAGTTCTAAGAGTTAGGACCATGCATATAAGTTCTCCAATTCTTGCAGCAAAAAGCCCTTTCTTTTATAAGGTATCAGAAGAGGCTGCCATTATGGACGTACTTAATTTTATGTATAGTAATACTTTATCAAGAACTACATCTGCGGCTGTATTGGATGTGCTGATTGCTGCTGATAAATTTGAGGTTGTGTCATGCATAAGGTATTGCAGTATGATGTTGAGGTTTATACCCATGACTTGTGAGACTGCCTTACTTTATTTGGATCTTCCTTCAAGCATTTTGACGTCAGATGCAATTCAACCACTGTTAGAGACAGCAAAGTTGTTTCTTGTCACACACTACAGAGACATAACAAAGTTTGCAGATGAAGCACTGAATTTGCCCTTGTCTGGCATTGAAGCAGTGCTATCTAGCGATGACCTCCAGATGCTTTCAGAGGATGCTGTTTTTGAGTTTGTGCTGAAGTGGGCTAGGACACATTATCCAATAATTGAGGACCGGCAAGATGTCCTTGGAACATGCCTTGGTCAACTCATCCGTTTTCCATTAATGAGCTGCCGGAAACTGAAGAAGGTCTTATCATGCAACGACTTCCATCCTGATTTCGCATCAAAGGTTGTTCTTGAAGCTCTTTTCTACAAGGCAGAGACACCATATCGACAACGGTCTCTTGCTGCACAGGATGCTGGCAGCACGTACTCTCGTTTTGTGGAGCGAGCCTACAAGCTCCGTGGTGTGAAGGTGGTTGAATTTTTATTGCCCTGTCCGCGGTGTGTTGTATACCTTGACCTAAAGAAAGAAGAATGTGTGCAACTATTTCCTAATGCTAGAATTTACTCTCAGCCATTCGCCCTAGGGGAGCAATGGTTTTGCTTGTCAGTTCGGTGCAATATGGACCAGGAAAACGAATCCCATTGCTTTGGGCTTTTCTTAGCAATGCAATTCAAGGAAAGAGTATCTCTTCATGTTGACTATGAATTGGCTGCTAGATCAAAATCGACCGAGGAGTATATAAGCAGGTGTAAGGGAAATTTTACTTTCACAGCAGGCAAGGGTGTTGTAGGGTATAGGAACCTATTTGGTATTCCATGGACTGCATTCATAGCTGACGATAGCCATTTTTTCATCAAGGGATTACTTCATTTAAGAGCTGAACTTACTATTAGACAATAA 1458 0.4259 MTEAETDDVVTKCNFMFAFNNVNFSDRILNIEVIPDHPHFIPSQSHSLSLSPNRKRRRHTLIKDAEEAVAITQASPSGDEVSHGNDSSLGMSCSTVLRVRTMHISSPILAAKSPFFYKVSEEAAIMDVLNFMYSNTLSRTTSAAVLDVLIAADKFEVVSCIRYCSMMLRFIPMTCETALLYLDLPSSILTSDAIQPLLETAKLFLVTHYRDITKFADEALNLPLSGIEAVLSSDDLQMLSEDAVFEFVLKWARTHYPIIEDRQDVLGTCLGQLIRFPLMSCRKLKKVLSCNDFHPDFASKVVLEALFYKAETPYRQRSLAAQDAGSTYSRFVERAYKLRGVKVVEFLLPCPRCVVYLDLKKEECVQLFPNARIYSQPFALGEQWFCLSVRCNMDQENESHCFGLFLAMQFKERVSLHVDYELAARSKSTEEYISRCKGNFTFTAGKGVVGYRNLFGIPWTAFIADDSHFFIKGLLHLRAELTIRQ 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1759 485 Gene3D - 204 310 - -
Aed11g1759 485 SUPERFAMILY TRAF domain-like 371 483 - -
Aed11g1759 485 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN POB1 8 64 - -
Aed11g1759 485 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN POB1 65 485 - -
Aed11g1759 485 SUPERFAMILY POZ domain 101 168 IPR011333 -
Aed11g1759 485 Pfam BTB And C-terminal Kelch 196 288 IPR011705 -
Aed11g1759 485 SMART BACK_2 187 289 IPR011705 -
Aed11g1759 485 PANTHER OS02G0260700 PROTEIN 8 64 IPR045890 -
Aed11g1759 485 PANTHER OS02G0260700 PROTEIN 65 485 IPR045890 -
Aed11g1759 485 CDD BTB_POZ_ZBTB_KLHL-like 100 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1759 Aed-Chr11 21065444 21069246 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1759 - - gmx:100780975 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1759 11 21065444 21069246 Aed11g1759 11 21065444 21069246 ECH