Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1747 ATGAACGGTGCTCCCAAGCACGAACGCCGGTGGGCGTCTGACACGGTGCCGGAGATGGCATTCGTCAGCGCCGGGACTTCGCCGGGAACTGAGTACAACTCCGTCTTTTCCGATGAGTACGTTGAGGTCACTCTTGATGTTCAAGACGATCACACCATCGTTCTCCGCGGCGTTGAGCCGGTGACTGTCGTTAACGTCGACGACGGTGTCAACACAAGCGGAAACGAAACTCTGGCATCGGCCGTGTTGTCGCCGTCGATCAGGAGGGGCTCTCCCAACCGGTGGAGGCAGTTCTCGCAGGAGCTCAAGGCTGAGGCGGTTGCGAAGGCGAAGCAGTTCTCACAGGAGCTCAAGGCGGAGCTTCGGTGGTTCTCGTGGAGCCAAGGCGGGTCTGAAACGGCTCTGGTGGCTCGAGATCTTAGAAAGCAGCGCGCTCAGCTTGAACGCAACCGCTCCGGTACGAAAAAAGCACTCCGTGGACTCAAATTTATTAGCAGTAAATCCAATGGCGTTGACACCTGGAACGAGCTGCAAAGAAATTTCGATAATCTTGCCAAAGACAGTTATCTCTACCGCACCGATTTCGCGCAATGCATAGGGATGAATGACTCTAAGGAGTTCGCTCTGGAACTATTCGACGCTCTGAGTCGTAGACGAAGACTGAAGGTTGAAAAGATCAGCAGAGACGAGCTTAACGAATTCTGGGCGCAAATTACCGATCAAAGCTTTGATTCGCGGCTTCAAATTTTCTTCGACATGGTGGACAAGAATGAAGATGGTAGAATTGCCGAAGAAGAAGTGAAAGAGATCATTATGCTAAGCGCTTCAGCTAATAAGCTATCCAGATTGAAAGAGCAGGCTGAAGAATACGCAGCTTTGATCATGGAAGAGTTAGATCCTGAAAGACTTGGCTACATTGAGCTATGGCAATTGGAGACGCTTCTGTTACAAAAGGACACGTATCTCAACTACAGTCAAGCACTAAGTTACACCAGTCAAGCTTTGAGCCAGAACCTACAAGGACTAAGGGCGAGAAGTCCGATACGTAGGATGAGCCACAGAATGCTCTACTATTTGCAAGAAAATTGGAGGAGACTTTGGGTTTTAGCATTCTGGATTTCCACTATGATTGGACTGTTTACCTGGAAGTTCATGGAGTACAAGAGAAAAAATGCTTATCATATCATGGGTTACTGTCTACTCGCAGCCAAAGGTGCTGCTGAGACTCTGAAGTTCAACATGGCACTTATACTCTTGCCCGTCTGCAGAAATACCATAACCTGGCTCAGATCCACCAAGTTGGCTTACGTTGCACCTTTCGATGATAATATCAACTTTCATAAGACAATTGCAGCGGCAGTAGTGATTGGTGTTATTCTTCATGCCGGGAATCACCTTGCTTGTGATTTTCCTAGACTTGTAAATTCGTCTGATGCTACTTATGAGAAGTATTTGGGTGGCGTATTTGGTGATCATAAACCCAGTTACGGAGACCTCGTTAAAGGGATTGAGGGTGTGACTGGAATTCTGATGGTGATTTTGATGACAATAGCGTTTACTCTTGCAACAAAATGGTTCAGGAGAAATCTCATCAAGCTTCCTAAACCGTTTAATAGGCTCACTGGTTTCAATGCGTTCTGGTATTCACACCACCTATTTGTGATTGTCTATGTCCTGCTCATCATTCATGGTGTAAATCTTTACCTCGAGCGCAGATGGCACCTTCAAACGACATGGATGTATCTTGCCGTTCCAATTTTACTGTATGCGGGAGAAAGAACGCTAAGATTCTTCCGTTCTGGTTTCTATACCGTCCGTCTTATAAAGGTTGCCATTTATCCTGGAAATGTTCTGACATTGCAAATGTCGAAGCCCTCTCAATTTCGTTACAAGAGCGGACAGTACATGTTTGTGCAATGTCCTGCTGTTTCTCCATTTGAGTGGCATCCGTTTTCTATTACCTCTGCCCCTGATGATGACTACTTGAGTGTTCACATACGGCAACTGGGAGATTGGACACGGGAGCTCAAAAGGGTATTCTCTGCGGCCTGTGAGCCTCCCGTAGCTGGGAAGAGCGGGCTTCTCAGGGCTGATGAAACCACCAAGAAATGTTTACCAAAGCTAAGAATAGATGGACCTTACGGTGCGCCAGCACAAGACTACAGAAACTATGATGTCCTGTTACTTGTCGGTCTTGGGATAGGAGCAACACCTTTTATCAGCATTCTAAAAGATCTTCTCAACAATATTATCAAAATGGAAGAGTTGGCGGATTCCGTCTCTGATTCAAGTAGAGGTTCAGACCTTAGCACCGGGAGTGCAGATTCACTATCTTCTAATAAGATTTCTCCTAAACGGAAGAAGACACTGAAGAATACCAACGCTTATTTCTACTGGGTAACAAGAGAACAGGGTTCTTTCGATTGGTTTAAAGGGGTCATGAATGAAGTTGCTGAACTTGATCAAAGGGGTGTTATTGAGATGCACAACTACTTAACTAGCGTGTACGAGGAAGGTGATGCCAGATCCGCCCTCATTACAATGGTGCAAGCCCTCAACCATGCAAAAAATGGAGTTGATATTGTTTCTGGGACTAGAGTGAGAACTCATTTTGCTAGGCCTAACTGGAAGAAGGTTTTCTCTAAAATATGCTCTAAGCACTGCAATGGACGAATAGGGGTTTTCTATTGTGGCGCACCGGTATTGGCCAAAGAATTAAGCAAGCTCTGCTTCGAGTTCAATGAAAAAGGTCAAACAAAATTTGAGTTCCACAAGGAGCATTTCTAA 2787 0.4604 MNGAPKHERRWASDTVPEMAFVSAGTSPGTEYNSVFSDEYVEVTLDVQDDHTIVLRGVEPVTVVNVDDGVNTSGNETLASAVLSPSIRRGSPNRWRQFSQELKAEAVAKAKQFSQELKAELRWFSWSQGGSETALVARDLRKQRAQLERNRSGTKKALRGLKFISSKSNGVDTWNELQRNFDNLAKDSYLYRTDFAQCIGMNDSKEFALELFDALSRRRRLKVEKISRDELNEFWAQITDQSFDSRLQIFFDMVDKNEDGRIAEEEVKEIIMLSASANKLSRLKEQAEEYAALIMEELDPERLGYIELWQLETLLLQKDTYLNYSQALSYTSQALSQNLQGLRARSPIRRMSHRMLYYLQENWRRLWVLAFWISTMIGLFTWKFMEYKRKNAYHIMGYCLLAAKGAAETLKFNMALILLPVCRNTITWLRSTKLAYVAPFDDNINFHKTIAAAVVIGVILHAGNHLACDFPRLVNSSDATYEKYLGGVFGDHKPSYGDLVKGIEGVTGILMVILMTIAFTLATKWFRRNLIKLPKPFNRLTGFNAFWYSHHLFVIVYVLLIIHGVNLYLERRWHLQTTWMYLAVPILLYAGERTLRFFRSGFYTVRLIKVAIYPGNVLTLQMSKPSQFRYKSGQYMFVQCPAVSPFEWHPFSITSAPDDDYLSVHIRQLGDWTRELKRVFSAACEPPVAGKSGLLRADETTKKCLPKLRIDGPYGAPAQDYRNYDVLLLVGLGIGATPFISILKDLLNNIIKMEELADSVSDSSRGSDLSTGSADSLSSNKISPKRKKTLKNTNAYFYWVTREQGSFDWFKGVMNEVAELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDIVSGTRVRTHFARPNWKKVFSKICSKHCNGRIGVFYCGAPVLAKELSKLCFEFNEKGQTKFEFHKEHF 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1747 928 SFLD NADPH oxidase subgroup (NOX) 104 928 - -
Aed11g1747 928 SUPERFAMILY EF-hand 172 324 IPR011992 -
Aed11g1747 928 Gene3D - 715 928 IPR039261 -
Aed11g1747 928 MobiDBLite consensus disorder prediction 761 780 - -
Aed11g1747 928 PANTHER NADPH OXIDASE 29 928 - -
Aed11g1747 928 Pfam FAD-binding domain 603 717 IPR013112 GO:0016491
Aed11g1747 928 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 721 928 IPR039261 -
Aed11g1747 928 CDD EFh 225 272 IPR002048 GO:0005509
Aed11g1747 928 Pfam Respiratory burst NADPH oxidase 146 245 IPR013623 GO:0004601|GO:0050664
Aed11g1747 928 ProSiteProfiles EF-hand calcium-binding domain profile. 242 277 IPR002048 GO:0005509
Aed11g1747 928 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 600 720 IPR017927 GO:0016491
Aed11g1747 928 PRINTS Cytochrome B-245 heavy chain signature 729 746 IPR000778 GO:0016020|GO:0016491
Aed11g1747 928 PRINTS Cytochrome B-245 heavy chain signature 506 529 IPR000778 GO:0016020|GO:0016491
Aed11g1747 928 PRINTS Cytochrome B-245 heavy chain signature 706 719 IPR000778 GO:0016020|GO:0016491
Aed11g1747 928 ProSitePatterns EF-hand calcium-binding domain. 255 267 IPR018247 -
Aed11g1747 928 Gene3D Translation factors 592 683 - -
Aed11g1747 928 Gene3D - 147 263 - -
Aed11g1747 928 Pfam Ferric reductase NAD binding domain 724 910 IPR013121 GO:0016491
Aed11g1747 928 PANTHER RESPIRATORY BURST OXIDASE2 29 928 - -
Aed11g1747 928 MobiDBLite consensus disorder prediction 761 781 - -
Aed11g1747 928 Pfam Ferric reductase like transmembrane component 405 561 IPR013130 -
Aed11g1747 928 CDD NOX_Duox_like_FAD_NADP 607 870 - -
Aed11g1747 928 SUPERFAMILY Riboflavin synthase domain-like 603 717 IPR017938 -
Aed11g1747 928 Coils Coil 273 293 - -
Aed11g1747 928 Coils Coil 137 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1747 Aed-Chr11 21002755 21012270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1747 9 928 Miscellaneous Gene Families AT1G64060 75.556 0.0 1483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1747 K13447 - gmx:100805517 1758.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1747 11 21002755 21012270 Aed11g1747 11 21002755 21012270 ECH
Aed11g1747 11 21002755 21012270 Aed5g2324 5 24929206 24938255 PCT