Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1746 ATGAGGGTGTTTCCAAGGCTTAAATCCCTGTCAAGATCAGCAGTGCATGATCAGGAACAAGACAGTGATCATGCAGAAAAGTTGTTGTGCCGCACATCCCTAACAGTTTGGAGAAAATCCTTGGTCATGAGTTGCAAAGGATTCACGGTGATTGATTCTAACGGAAATCTGGTGTATCGTGTTGACAATTATATTGGTCGACCCAACGAAGTCACTCTCATGGATGCCTCAGGAAAATCTATCCTCACCATGTGCCGCCGAAGGAAGCTTGGATTGTTAGATAGCAGTTGGTTTGTGTATGAAGGGGAAGTAGTGGGGAACAATAATAACATGCGTACGAGGACTAGTAACGTATCTAAGTCATCAAAGGCTACTCCAATTTGTTGTGTAAGGAAGCATGTGAATATTTTACATGGCAACACCAACGTTCAGGCCTACGTCTACCGTGGAGCTTCACATTCATCAGATAAACGGCGTGCGGCGTTTACTATAGAGGGTTCCTACGCACATCGAACGTGTAAGGTGTTGGATGAGTGCAGAAGGGTCGTCGCTGAAATCAAGAGGAAGGAAGCCAACACCAAAAACGTCTCTTTTGGGATTGAGATTTTTCAATTATTTGTGCACCCTGCCTTTGATCCTGCCTTTTCCATGGCACTCGTCTTACTCCTCGATCAAATGTTTTCTTGA 687 0.4454 MRVFPRLKSLSRSAVHDQEQDSDHAEKLLCRTSLTVWRKSLVMSCKGFTVIDSNGNLVYRVDNYIGRPNEVTLMDASGKSILTMCRRRKLGLLDSSWFVYEGEVVGNNNNMRTRTSNVSKSSKATPICCVRKHVNILHGNTNVQAYVYRGASHSSDKRRAAFTIEGSYAHRTCKVLDECRRVVAEIKRKEANTKNVSFGIEIFQLFVHPAFDPAFSMALVLLLDQMFS 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1746 228 Gene3D - 30 228 IPR038595 -
Aed11g1746 228 PANTHER PROTEIN LURP-ONE-RELATED 17 16 227 - -
Aed11g1746 228 Pfam LURP-one-related 32 221 IPR007612 -
Aed11g1746 228 SUPERFAMILY Tubby C-terminal domain-like 32 227 IPR025659 -
Aed11g1746 228 PANTHER - 16 227 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1746 Aed-Chr11 20988820 20989790 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1746 - - gmx:100804978 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1746 11 20988820 20989790 Aed11g1746 11 20988820 20989790 ECH
Aed11g1746 11 20988820 20989790 Aed5g2323 5 24909574 24911726 PCT