Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1741 ATGGAAGATCTTCAGAATTCGACGCTAAAATTCTTCTCAGATCAAGAGCTTTGTTACGCTGATATCGTCCCTCCTGCTCAGGTCCGAGCCAGAATTGAAGTCTCTGTCCTCAATTTTCTCAAAATACTAAATGCGTCCAACCCTGCCATCTCAGATTTGCCTTTGATTCAGAGAAAATATAGCAACAGTCGAGTGAATCATGGCCTGTTGACTGAACTTTCACGTGTTTTTCTCTCCAATTCCGTATCGACAAGGTCTCTGATGAGACCTAATGCAGCAAAGGCCTTCGTTAGGGTGTGGAAGGTGATGGAACTGTGCTATCAGATATTGCTTCAGGAAAAGCGTGTCACCCAGAGGGAGCTCTTCTACAAGCTGCTGTGCGATTCGCCGCACCTGTTTCCTTCTCAAACACATGTCAACAGGACAATTCAAGATCTTGTATCATTGCTTCGGTGCAGCCGATACAGTCTTGGAATCATGGCATCTAGTAGAGGACTCATAGCTGGCCGTCTGATTTTGCAGGAACCAAGCAAAGAGGCTGTTGATTGCTCTTTATGTGGTTCTTCTGGATTTCCAATTTCTGGTGACTTGAATTTGTTGGATAGTTTGGTTCTAAGTGCAGATGCTCGGTACGTTTTAATTGTGGAAAAGCGGCTTACTGAGGATCGGTTTTTTCATCAAATTCCAAGTATTCTCATCACGGCTAAAGGCTACCCAGATATGGCCACAAGATTTCTTCTCTATCGAATCAGTCGAGCTTTTCCAGACTTGCCAATTCTAGCTTTGGTGGATTGGAATCCAGCTGGATTAGCTATTCTATGCACCTTCAAATTTGGAAGCGATCTGCAAATTGCTCAAAGCTTGATGTCCTCGGGAATCTTACAGGATAATTACAAGGAAGAAGTGGCCTTAATGGTTCAGAGCCAAAGGAGAGCTGAAATCGAGGCCCTATACTTTCATGGATATGATTATTTGGGGAAGTACGTCGCTAAAAAAATTGTACAGTCAGATTATGTATAA 1020 0.4324 MEDLQNSTLKFFSDQELCYADIVPPAQVRARIEVSVLNFLKILNASNPAISDLPLIQRKYSNSRVNHGLLTELSRVFLSNSVSTRSLMRPNAAKAFVRVWKVMELCYQILLQEKRVTQRELFYKLLCDSPHLFPSQTHVNRTIQDLVSLLRCSRYSLGIMASSRGLIAGRLILQEPSKEAVDCSLCGSSGFPISGDLNLLDSLVLSADARYVLIVEKRLTEDRFFHQIPSILITAKGYPDMATRFLLYRISRAFPDLPILALVDWNPAGLAILCTFKFGSDLQIAQSLMSSGILQDNYKEEVALMVQSQRRAEIEALYFHGYDYLGKYVAKKIVQSDYV 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1741 339 Gene3D - 163 282 - -
Aed11g1741 339 SUPERFAMILY DNA topoisomerase IV, alpha subunit 93 339 IPR036078 GO:0003677|GO:0005694
Aed11g1741 339 CDD TOPRIM_TopoIIB_SPO 210 324 IPR034136 -
Aed11g1741 339 Gene3D - 283 339 - -
Aed11g1741 339 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 281 338 - -
Aed11g1741 339 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 14 281 - -
Aed11g1741 339 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 281 338 IPR002815 GO:0003677|GO:0003918|GO:0005694
Aed11g1741 339 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 14 281 IPR002815 GO:0003677|GO:0003918|GO:0005694
Aed11g1741 339 Gene3D - 22 162 IPR036388 -
Aed11g1741 339 PRINTS DNA topoisomerase VI subunit A family signature 154 169 IPR002815 GO:0003677|GO:0003918|GO:0005694
Aed11g1741 339 PRINTS DNA topoisomerase VI subunit A family signature 264 280 IPR002815 GO:0003677|GO:0003918|GO:0005694
Aed11g1741 339 PRINTS DNA topoisomerase VI subunit A family signature 231 252 IPR002815 GO:0003677|GO:0003918|GO:0005694
Aed11g1741 339 PRINTS DNA topoisomerase VI subunit A family signature 136 153 IPR002815 GO:0003677|GO:0003918|GO:0005694
Aed11g1741 339 Pfam Type IIB DNA topoisomerase 94 159 IPR013049 GO:0003677|GO:0003824|GO:0005524|GO:0005694|GO:0006259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1741 K10878 - gmx:100784732 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1741 11 20965710 20967977 Aed11g1741 11 20965710 20967977 ECH