Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1739 ATGGCAGCATCTTCCTTGACAACATGTTCCATCCTCTTCCCATCCACAACTACCTCTAAATCCCCTCCTCAATTGTTTGCCTCTTTTCCTTGTAAACACCTTCCCAGACTCCGTCTCAGACCAATCGTCTCAGCCGCTTCAGCCCCAACCCCCAACCCCTCCATCCATGTCGAGAAATCCCCAGTCTCCGGCACTCCCTCGAAGGTTCTCCCCTTTCGGGTGGGGCACGGCTTTGACCTCCACCGATTGGAACCCGGTTACCCTCTAATAATCGGTGGAATTAGCATTCCCCACGATAGAGGTTGCGAGGCTCATTCCGATGGGGACGTTCTGCTTCACTGCGTCGTCGATGCTATTCTAGGGGCGCTAGGTCTTCCTGATATTGGCCAAATCTTTCCCGATTCTGATCCTAAGTGGAAGGGTTGTGCCTCTTCCGTCTTCATCCATGAATCTGTGAGGCTTATGCATGAGGCCGGTTATGAGATTGGAAATTTAGATGCTACATTGATACTTCAGAGGCCAAAACTAAGCCCACACAAGGATGTTATCAAGGCCAACTTATCTGCACTGCTTGGAGTGGACTCTTCTGTAGTAAATATCAAAGCAAAAACTCATGAAAAGGTAGACAGCCTTGGAGAAAATAGAAGTATAGCGGCTCACACAGTGGTTCTTCTAATGAAGAAATGA 687 0.4876 MAASSLTTCSILFPSTTTSKSPPQLFASFPCKHLPRLRLRPIVSAASAPTPNPSIHVEKSPVSGTPSKVLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGCASSVFIHESVRLMHEAGYEIGNLDATLILQRPKLSPHKDVIKANLSALLGVDSSVVNIKAKTHEKVDSLGENRSIAAHTVVLLMKK 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1739 228 Hamap 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 72 227 IPR003526 GO:0008685|GO:0016114
Aed11g1739 228 ProSitePatterns 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 106 121 IPR020555 GO:0008685
Aed11g1739 228 PANTHER 2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE, CHLOROPLASTIC 7 228 IPR003526 GO:0008685|GO:0016114
Aed11g1739 228 TIGRFAM ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 73 227 IPR003526 GO:0008685|GO:0016114
Aed11g1739 228 CDD MECDP_synthase 73 225 IPR003526 GO:0008685|GO:0016114
Aed11g1739 228 Pfam YgbB family 72 225 IPR003526 GO:0008685|GO:0016114
Aed11g1739 228 PANTHER 2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE 7 228 - -
Aed11g1739 228 Gene3D - 69 228 IPR036571 GO:0008685|GO:0016114
Aed11g1739 228 SUPERFAMILY IpsF-like 71 227 IPR036571 GO:0008685|GO:0016114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1739 K01770 - gmx:100306378 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1739 11 20949723 20952354 Aed11g1739 11 20949723 20952354 ECH