Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1729 ATGGCTGTGCTACCTTTCTCATACTCAGGATCTCCCACTTTATCTCTACCATTGTCTCAACAAAAATGGCTTAAAACAAAATCAAAATCAAGGACATGGTGCCAAAGCCAAACAGAAGTAAATGGAGCTGCTGTTCCGCCTCGGCCTCGAAGGATAATCCTAGTTAGGCATGGAGAGAGCGAAGGAAACGTGGATGAGAGCGTGTACACCAGGGTACCTGATCCTAAGATATCACTCACCGATAAAGGCAAGTCCCAAGCAGAGGAATGCGGCTACAGGATCAAGCAAATTATTGAGAATCACCAACATTGGCAGGTTTACTTCTACGTCTCTCCTTATAGAAGGACCCTTCAAACATTGCAGCACCTCGCTCGTCCCTTTCAACGCCACAGAATCGCTGGCTTCAGAGAAGAGCCTCGCATTAGAGAACAAGATTTCGGTCGGTATTTTACTCTTCTCTGTGTCTGTGTCTCCGTTTTCCAATTCAGCTCACTAATTCATTCTGTGATTTTAAAAGGGAATTTTCAAAACAGAGAAAAGATGCGAGTAGAAAAGGCATTACGCCAGCGTTATGGTCGTTTCTTTTATCGATTTCCAGATGGAGAATCCGCTGCTGATGTATATGATAGAATAACAGGATTTAGAGAAACGTTGAGAGCAGATATTAATATTGGACGGTATCAGCCACCTGGGGAGAAGAAAACAGACATGAACTTAGTAATCGTGAGTCATGGTCTAACACTTCGAGTTTTTCTCATGAGGTGGTACAAATGGACGGTTCAACAGTTTGAGGGTCTCAACAACATGGCCAATGGAAATATGCTTGTCATGGAAAAGGGTTATGGTGGAAGGTATAGCTTACTGATGCATCATGATGAACAAGAGCTAAGACGGTTTGGATTGACTGATGAAATGTTGATTGATCAGGAGTGGCATAAATTGGCAAGGCCTGCTGATCTGAACTACGATTGTCCAATGGTGAATTCCTTCTTTCCCCATCTCAGCGAAGAAGAAACAAGCATCTGTGAACAAGGAAGCTGA 1041 0.4332 MAVLPFSYSGSPTLSLPLSQQKWLKTKSKSRTWCQSQTEVNGAAVPPRPRRIILVRHGESEGNVDESVYTRVPDPKISLTDKGKSQAEECGYRIKQIIENHQHWQVYFYVSPYRRTLQTLQHLARPFQRHRIAGFREEPRIREQDFGRYFTLLCVCVSVFQFSSLIHSVILKGNFQNREKMRVEKALRQRYGRFFYRFPDGESAADVYDRITGFRETLRADINIGRYQPPGEKKTDMNLVIVSHGLTLRVFLMRWYKWTVQQFEGLNNMANGNMLVMEKGYGGRYSLLMHHDEQELRRFGLTDEMLIDQEWHKLARPADLNYDCPMVNSFFPHLSEEETSICEQGS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1729 346 CDD HP_PGM_like 51 278 IPR013078 -
Aed11g1729 346 Gene3D - 48 309 IPR029033 -
Aed11g1729 346 Pfam Histidine phosphatase superfamily (branch 1) 52 149 IPR013078 -
Aed11g1729 346 Pfam Histidine phosphatase superfamily (branch 1) 173 279 IPR013078 -
Aed11g1729 346 PANTHER BROAD-RANGE ACID PHOSPHATASE DET1 173 335 - -
Aed11g1729 346 PANTHER BROAD-RANGE ACID PHOSPHATASE DET1 34 149 - -
Aed11g1729 346 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 54 63 IPR001345 GO:0003824
Aed11g1729 346 SMART PGAM_5 51 251 IPR013078 -
Aed11g1729 346 SUPERFAMILY Phosphoglycerate mutase-like 49 289 IPR029033 -
Aed11g1729 346 PANTHER OS06G0109000 PROTEIN 173 335 - -
Aed11g1729 346 PANTHER OS06G0109000 PROTEIN 34 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1729 Aed-Chr11 20880554 20881809 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1729 - - gmx:100800012 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1729 11 20880554 20881809 Aed11g1729 11 20880554 20881809 ECH