Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1719 ATGGTGAATCGTCGACGCCTCACTCGGGTGGCGACGAGTGACGATGAAGACGAAGCTCCGCGTCCACAACGCACGCGGAAGAGGATGAGGCTTATCGATAACGATTACGAGAATGAAGAAGAACAACAAGAGGTACCGGAACCGCCTCCGCCTGCGGAGGATGCTAAACCTCTTGGTGAACCTGTTAGGGTTTCGGGAAAAGGAAGAGGCAGGAAGAGGCACTATGACTCCTTCGAATTCGACGGCATCCAATATACTCTCGAGGATCCTGTTCTTCTCGTACCGGAGGAGAAAAACCAGAAGCCATATGTCGCAATTATTAAGGACATTACGCAGTCTATCAGTGGCAACGTGAAAGTGACGGGGCAGTGGTTTTATCGTCCCGAAGAAGCTGAGAAAAAAGGTGGCGGAAACTGGCAATCCTGTGATACGAGGGAGTTGTTTTACAGTTTCCACCGTGATGATGTTCCTGCAGAGGCTGTTATGCACAAGTGTGTGGTGCATTTTGTTCCCAAACACAAACAGCTTCCCAAACGTAAGGATCATCCCGGTTTTATTGTACAGAAGGTTTATGACACTGTGGAAAGAAAACTCTGGAGGCTGAGTGATACGGACTATGAAGATATTAAACAGCAAGAGATTGATGTGCTTGTAGTGAAGACTCTGGATCGTATCGGTGAACTACTTGACCTTGAGCCTGAGGAAGCCCCTGATGATGATGAGGACCAATTGAAAAATAAAAAAACCTTTAGGAGAAAGAGCGTTTCACCTGTTGATGTCTCAAAGGAGGAGGAGGAAACTCTTAAGGGTGAACAACATCCAAAATCTGAAACACCAGCGGGTCATGAAGCTAATGCCTCAGAGTATTATAGCATATTGGTAACTTTCAATGCACTAACTGGAGATAGCCATCGTGACAAATGGTTGGAGAGGTTGCTTCAACGCATTCAGTACATTTGTGATTCTACTGATAGCAAAGAAAGGGATAAAGGATTAGGAAATGTTCATTCTGATGAAATCAACAGTGAAAGCAAGAATAGAATCTCAGAATCAGCAAATGACTGTCAAGACAAGGGTCAGAAGAGTTCCGAGTCTTTTATCTGGCCAGATGCTGCTGTTTCAGCCATAGTAGCTCTTGAAAAAGCTTCACATGATGCTCTTTCATCAGATTCTATGAAATACAACCAAAAGTTGCGGCAATTAGCTTTTAATCTCCAGAAAAATGCAGTGTTAGCACGCCATCTATTAAATGGAGAGTTGAAGCCTTCAAAAATATTAAATATGACACCCAATGAATTAAAGGAGGGTTTGGTTGCTGATGAAAAAACCAAGGAGGAAGCTGACGATACACAGCACTTGCAAATGACAGATGCCCGCTGCTCAAAATGCATGGATTGTAAGGTGGGCTTGAGAGAGATTATTCAAGCTGGATATAATGAACGTTATCAGCTGGAATGTGTTTCTTGTGGTCATTCCTGGTATGCCTCCCGGGATGAGGTGTCTATGCCAACCGTAGTTACATCGGATTCAAAGGGAAACATAGGCACAACGCCATAG 1557 0.4432 MVNRRRLTRVATSDDEDEAPRPQRTRKRMRLIDNDYENEEEQQEVPEPPPPAEDAKPLGEPVRVSGKGRGRKRHYDSFEFDGIQYTLEDPVLLVPEEKNQKPYVAIIKDITQSISGNVKVTGQWFYRPEEAEKKGGGNWQSCDTRELFYSFHRDDVPAEAVMHKCVVHFVPKHKQLPKRKDHPGFIVQKVYDTVERKLWRLSDTDYEDIKQQEIDVLVVKTLDRIGELLDLEPEEAPDDDEDQLKNKKTFRRKSVSPVDVSKEEEETLKGEQHPKSETPAGHEANASEYYSILVTFNALTGDSHRDKWLERLLQRIQYICDSTDSKERDKGLGNVHSDEINSESKNRISESANDCQDKGQKSSESFIWPDAAVSAIVALEKASHDALSSDSMKYNQKLRQLAFNLQKNAVLARHLLNGELKPSKILNMTPNELKEGLVADEKTKEEADDTQHLQMTDARCSKCMDCKVGLREIIQAGYNERYQLECVSCGHSWYASRDEVSMPTVVTSDSKGNIGTTP 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1719 518 ProSiteProfiles TFIIS central domain profile. 304 461 IPR003618 GO:0006351
Aed11g1719 518 MobiDBLite consensus disorder prediction 8 36 - -
Aed11g1719 518 ProSiteProfiles BAH domain profile. 83 202 IPR001025 GO:0003682
Aed11g1719 518 Gene3D - 286 435 IPR036575 GO:0006351
Aed11g1719 518 MobiDBLite consensus disorder prediction 233 283 - -
Aed11g1719 518 SMART BAH_4 83 202 IPR001025 GO:0003682
Aed11g1719 518 Gene3D - 7 191 IPR043151 -
Aed11g1719 518 Pfam BAH domain 84 198 IPR001025 GO:0003682
Aed11g1719 518 Pfam Transcription factor S-II (TFIIS), central domain 300 451 IPR003618 GO:0006351
Aed11g1719 518 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 518 - -
Aed11g1719 518 CDD BAH_plant_3 65 211 - -
Aed11g1719 518 MobiDBLite consensus disorder prediction 325 361 - -
Aed11g1719 518 SMART mid_6 338 443 IPR003618 GO:0006351
Aed11g1719 518 MobiDBLite consensus disorder prediction 325 354 - -
Aed11g1719 518 MobiDBLite consensus disorder prediction 1 71 - -
Aed11g1719 518 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 518 - -
Aed11g1719 518 MobiDBLite consensus disorder prediction 240 278 - -
Aed11g1719 518 SUPERFAMILY Elongation factor TFIIS domain 2 298 434 IPR036575 GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1719 Aed-Chr11 20812090 20815997 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1719 - - gmx:100776280 891.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1719 11 20812090 20815997 Aed11g1719 11 20812090 20815997 ECH