Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1709 ATGGCAAATGCAGCGTCCGGAATGGCTGTGCATGATGACTGCAAACTGAAGTTCCAGGAGCTTAAAGCAAAGCGGACCTTCAGATACATTACATTCAAAATTGATCAACAACAAGTTGTGATTGATAAAATTGGCTTATCGGCCGAAAGCTACACCGATTTTCAGGCCAGTTTGCCATCTGATGAGTGTCGTTATGCCGTCTATGATTTTGATTTCACTACCAATGAGAATTGCCAGAAAAGCAAGATCTTCTTCATTGCATGGTCACCAGACACTTCAAGGGTGAGGATGAAGATGGTGTATGCAAGTTCCAAGGATAGATTCAAGAGGGAACTGGATGGCATTCAAGTCGAACTGCAAGCAACTGATCCAAGCGAGATGGGCTTGGACATTGTCAAAGCAAGAGCCTTCTAA 414 0.4372 MANAASGMAVHDDCKLKFQELKAKRTFRYITFKIDQQQVVIDKIGLSAESYTDFQASLPSDECRYAVYDFDFTTNENCQKSKIFFIAWSPDTSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMGLDIVKARAF 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1709 137 SMART adf_2 12 137 IPR002108 GO:0003779
Aed11g1709 137 PANTHER COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN 2 137 - -
Aed11g1709 137 Pfam Cofilin/tropomyosin-type actin-binding protein 14 133 IPR002108 GO:0003779
Aed11g1709 137 PANTHER COFILIN-RELATED 2 137 IPR017904 GO:0015629|GO:0030042
Aed11g1709 137 Gene3D Severin 1 136 IPR029006 -
Aed11g1709 137 ProSiteProfiles ADF-H domain profile. 5 137 IPR002108 GO:0003779
Aed11g1709 137 SUPERFAMILY Actin depolymerizing proteins 2 134 - -
Aed11g1709 137 CDD ADF_cofilin_like 6 136 IPR017904 GO:0015629|GO:0030042
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1709 Aed-Chr11 20728402 20730926 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1709 K05765 - gmx:100785437 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1709 11 20728402 20730926 Aed11g1709 11 20728402 20730926 ECH
Aed11g1709 11 20728402 20730926 Aed5g2268 5 24528652 24530395 PCT