Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1704 ATGTTTCGTTCTGCAAGATGGAGAAGCGAGAAGAACAGGGTCAAAGCTGTTTTCAAGCTCCACTTTCATGCCACCCAGGTGTTTCAATCTGGGATGGATGCATTGGTGCTGTCTATAGTTCCAGGGGACATTGGAAAGCCAACTACGAAATTAGACAAAGCTACAGTTCGAGACGGAACTTGTAGATGGGAAAATCCTGTGTATGAAACTGTCAAGTTTATTCAGGAGCCTAAGACTGGGAAAATCAGTGACAAAATATATCATTTTTTGGTTTCAACGGGTTTACCAAAAGCTAGTTCCATTGGGGAGGTTTCTATAAATTTTGCTGATTATGTGGAAGCCTCAAAGCCCTCCTCTGTCGCTCTTCCCATCAGGATTTCTCATTGTGATGCTGTTTTGCATGTATCAATTCAGAGGCTGCAAGAAAACGGTGATCGAAGAGAGGAGGATGAATGTGAAGATGCCAAACTAAAATCCGATGATAGGAGCTCAGGGAATCAATTAAGCAACGCTGATACGGATGAAACAAGTAGAAGCTATTCTTCTGAAGACGTCTCTGCCAAAGCAATCATCAACAGAACTGATTTGAGCTCTTCTAATTATAGGACATCTAGTGGCTCTGATATGACATTGTCAAGTTCTGATGACAGCTCTGGACTTGATACTCCCCGCGAAATTGGACCTAGAAAAAAGAACATTCACCTCAACACAAAAAGGTTTCTTCCAGACCCAGTTTTGCACCATGCTTCAGAACCTCAAAACCTTTCTCTCAATGCCTCAACATCAATGCATCAGAGATCACACTGGGACTGGTCAACTGGTTCGGAGCACAGGCTAAGCACAGATGACTCAACATATGGCTCTCATCATAATTCTCTACCGAAGGAAAGCGACCAACAAACTTCCCCTTTAGAGATTGATAGTGTCAAGGCTGAACTTGCTGCTTTGGCAAGGCAGGTGGATGTGTCAGACTTGGAGTTACAGACACTCAGGAAGCAAATTGTGAAGGAATGCAAAAGAGGACAGGATCTCGCCAAAGAAGTCATTGTCTTGAAGGAGGAAAGGGATGCATTCAAGACAGAATGTGACAATCTCAGGTCTTTTCAGAAACGCATGGACGAGGCCAAAGTCAGAAACAGGTCACAGTTGGAAGGTGGAGATCTTCATGCTCTTGTTGAAGAAATAAGGCAAGAATTAGATTATGAGAAGGACCTCAATGCAAATCTCCGGCTACAGTTAAAGAAGATGCAAGAATCTAATGCCGAACTAGTTCTTGCTGTGCAGGATTTGGATGAAATGTTGGAGCAGAAAAATAGGGACATATGTAACCACTCCTATATAAATGAGCAAGATCAAAATTCCCAAGAGAAAAGGATAAAGCTCTCTAAATGTGAAACGGATGATGATGAAGAACAGAAAGCATTGGAGGAGCTTGTTAAGGAACACACTGAAGCCAATGAGACACACTTACTCGAGAAGAAAATAGTAGACCTCTATGGTGAAATAGAGATGTATAGGAGAGACAAAGATGAGTTAGAGATGCAGATGGAACAGCTTGCACTGGACTATGAGATATTGAAGCAGGAAAACCATGGCCTTGCATATAAGCTGGAGCAAAGCGAACTTCAAGAACAGTTGAAAATGCAGTATGAATGTTCATCTCCTCCTCCTGCTGCAATGAATGACATTGAAATCCACATCAAGAATCTGGAAGACCAACTCAAGGAACAATCAGAAGACTTCTCAAATTCTCTGGCTACCATCAAGGCACTTGAAAGCCATATCAGAGGATTAGAGGAGGAAATGGAGAAACAAGCACAGGGATTTGAAGCTGATCTAGAAGCAGTGATACGTGACAAAGTTGAACAAGAGCAAAGAGCCATCCAAGCTGAGGAAGTTTTGCGGAAGACCAGACTGAAAAATGCTAAAACTGCTGAGAGGCTTCAAGAGGAATTCCAAAGGCTCTCCACGCAAATGACCACCACGTTTGATGCGAATGAGAAGGCTACCATGAAGGCATTGACAGAAGCAAGTGCAGTGCGTGCACAGAAAAGTGTTATGGAAGAAAAGTTGCATAGGGTCAAAGAAGAACTCGAGTCAACTAAAGCTGATTATGGGGTCAAACTGAACCAACTTTCCAACCAAATAGATACGATGGAAGTTCAGATACGCCAGATGTTGTTGGAAATTGAAGACAAGTCCAAGCAGCTTGAAAATCAGAAGAAGCACGAGGAACAAGTTATTCGGGATTTCTCTGATGAGATCGTGCTACTCAAAGCTGAGCGTGGAAAGCTTAATGAGGAGATTTCATGCTTACATGAGCAAGTAGAAGGAAAAGAAGTTTTAAGAACTGACTTGGAAGCTATGAAGAAATCAATTGAGGAATATGAGGCACTGCTACAGAAAGGAACCGTGGAGAGAAATGAACTGGTGGGTACGATTTCATTGTTGAAGAAGGAGGCAGAACAGTCACTTAATGAGCTAAACAGAATGAGACATCGTAAGGATGAAAAAGAAACAGAGGTTAGAGTCTTGGAATCAGAGTTGGAGGAGATTAGAGCTCAGTACAGTGATCTGAAACTCTCTCTTTCCAAGGATGAAGCTGAGAAAGAAAAATTACAGAAGCAAGTTTTCCAGATAAAGAGTGAATTGAAGAAGAAAGATGATGCTTTAATCAGCGCAGAGAAGAGATTCAGGGAGAGTAAAAATATTTCAAAGAACAAAAAAACTGCTGCAGTTCCTCAGAATACAAAGGAAATAGTCAGTCTGAGGGAGAAAATAAAAACGCTCGAGGGAATAATACAGTCAAAGGAAACTGCCTTGGAAACTTCAAGAACTTCATTTTTGGAGAAGGAAAAGGAACTCCAGACCAAAATTAAGGAGCTGGAGAACAAAATGGAGGAATTCAACCAAAGTATTGCTTTGCAGAAGGTGGTTCAGGATAGAAGTACAGTTGAGCATCTCAATGCTGCTGCATTGTTATCCAAGAGTAACGTAAATTTGCCAGAGAAAGAAGCAGGAACCTCCATAATGGATACTGCAGATAGCAGTGTTGCTGAGTTATTAAGTGAGCTAACGTCATTGAAGGAGAGAAACAGATCAATGGAAAGCGAACTTAAAGAGATGCAAGAGAGATACTTAGAAATGAGCCTCAATTTTGCTGAGGTAGAAGGTGAAAGACAAAAGCTCGTTATGACAGTACGAAATCTTAAGAGTAACCAGAAAGGCTAA 3231 0.4157 MFRSARWRSEKNRVKAVFKLHFHATQVFQSGMDALVLSIVPGDIGKPTTKLDKATVRDGTCRWENPVYETVKFIQEPKTGKISDKIYHFLVSTGLPKASSIGEVSINFADYVEASKPSSVALPIRISHCDAVLHVSIQRLQENGDRREEDECEDAKLKSDDRSSGNQLSNADTDETSRSYSSEDVSAKAIINRTDLSSSNYRTSSGSDMTLSSSDDSSGLDTPREIGPRKKNIHLNTKRFLPDPVLHHASEPQNLSLNASTSMHQRSHWDWSTGSEHRLSTDDSTYGSHHNSLPKESDQQTSPLEIDSVKAELAALARQVDVSDLELQTLRKQIVKECKRGQDLAKEVIVLKEERDAFKTECDNLRSFQKRMDEAKVRNRSQLEGGDLHALVEEIRQELDYEKDLNANLRLQLKKMQESNAELVLAVQDLDEMLEQKNRDICNHSYINEQDQNSQEKRIKLSKCETDDDEEQKALEELVKEHTEANETHLLEKKIVDLYGEIEMYRRDKDELEMQMEQLALDYEILKQENHGLAYKLEQSELQEQLKMQYECSSPPPAAMNDIEIHIKNLEDQLKEQSEDFSNSLATIKALESHIRGLEEEMEKQAQGFEADLEAVIRDKVEQEQRAIQAEEVLRKTRLKNAKTAERLQEEFQRLSTQMTTTFDANEKATMKALTEASAVRAQKSVMEEKLHRVKEELESTKADYGVKLNQLSNQIDTMEVQIRQMLLEIEDKSKQLENQKKHEEQVIRDFSDEIVLLKAERGKLNEEISCLHEQVEGKEVLRTDLEAMKKSIEEYEALLQKGTVERNELVGTISLLKKEAEQSLNELNRMRHRKDEKETEVRVLESELEEIRAQYSDLKLSLSKDEAEKEKLQKQVFQIKSELKKKDDALISAEKRFRESKNISKNKKTAAVPQNTKEIVSLREKIKTLEGIIQSKETALETSRTSFLEKEKELQTKIKELENKMEEFNQSIALQKVVQDRSTVEHLNAAALLSKSNVNLPEKEAGTSIMDTADSSVAELLSELTSLKERNRSMESELKEMQERYLEMSLNFAEVEGERQKLVMTVRNLKSNQKG 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1704 1076 Coils Coil 1011 1059 - -
Aed11g1704 1076 Coils Coil 392 440 - -
Aed11g1704 1076 MobiDBLite consensus disorder prediction 143 161 - -
Aed11g1704 1076 Coils Coil 495 529 - -
Aed11g1704 1076 MobiDBLite consensus disorder prediction 273 303 - -
Aed11g1704 1076 Coils Coil 945 979 - -
Aed11g1704 1076 MobiDBLite consensus disorder prediction 198 236 - -
Aed11g1704 1076 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
Aed11g1704 1076 Coils Coil 779 806 - -
Aed11g1704 1076 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 6 1076 - -
Aed11g1704 1076 Coils Coil 560 619 - -
Aed11g1704 1076 MobiDBLite consensus disorder prediction 162 185 - -
Aed11g1704 1076 Coils Coil 814 890 - -
Aed11g1704 1076 MobiDBLite consensus disorder prediction 278 303 - -
Aed11g1704 1076 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 11 146 IPR019448 -
Aed11g1704 1076 Coils Coil 313 333 - -
Aed11g1704 1076 Coils Coil 677 768 - -
Aed11g1704 1076 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 6 1076 - -
Aed11g1704 1076 MobiDBLite consensus disorder prediction 198 220 - -
Aed11g1704 1076 MobiDBLite consensus disorder prediction 143 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1704 Aed-Chr11 20702615 20707873 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1704 - - gmx:100792602 1855.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1704 11 20702615 20707873 Aed11g1704 11 20702615 20707873 ECH
Aed1g2255 1 18743671 18748528 Aed11g1704 11 20702615 20707873 ECH
Aed11g1704 11 20702615 20707873 Aed5g2264 5 24490440 24495535 PCT