Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1689 ATGATGAAAGGTTCAAAACGTTTGGCCGCGTCGGAACCCAACCAGGTCGATACGAACGAAAGAGGGTTCCGGAATAAAAGAATAATGGAAGGATCCCTCTTCGATGTCCATAGGGCGGAACCATCTCAACAACCAACGGCAGCAGCACCACCATTGGATATGAAACGGGCGGAGTCATCACAGCAGCATGTGAGAGCTTTAAATACCCAGTTTGCAAGTTGGATTCAAACACAACTAAAGAATCATCCTGATGAACTTTGGGAAGATGGTGTGAGAGATTACTTAGATCATGCTTCAAGCATTATGGAAAAGTTTAGTGATGTTGTCAACTGGCTCAAAGCAAATGCCACCAAGCCAGAAAATTCGGCTGCTGATGCTGGAGCTGCTTTTTCTGGGAAAAAGCTCTTGCCCGAATTGATAAACAAAGAAAATAAATCTTTTGGAGAAAAAACTGGGTCTACTCCTGTTAGTACTGCTACAAATTTTACTAGTTCTTGGAGCCCTGGATTATTTTCAAACAGTCAAAGCATTTTTGGATTTGGAAATCAAAGTTCAGCTATCTCTAATCAGAGTTTGTCTCCCTCAAACCACAATGCTTCAGATGATGTAGACGGTGAAAGTGAATTGGAGCAGCCTAGCAGTCCATCAGTTAAGAAGTCAGAAGAGAAAGGTGTAGTAGTTGTACATGAAGTAAAGTGCAAGCTTTATGTGAAGTCAAGTGATCCAGCAGATAAAGATGTATGGAAAGATAAAGGAATGGGCCAATTGTCTATTAAATGCAAAGAGGGTGTCAGCAAGGCTACCAAAGAGTCCAAACCTACAGTTGTTGTCCGAAATGAGGTAGGAAGAATTCTTCTCAATGCCCTATTGTATCCAGGAATCAAGACAAATCCACAGAAGAATTCTCTTGTCGCTATATTCCATACTTCGGGTAATGCTGATGGAAGTGGTGGAGATAACGATAGTGTTGTTGCACGTACATTTTTGATCCGGATGAAAACTGAAGATGATCGAAATAAACTGGCTTCAACCATCCAAGAATATTCTCCAGTCTCTTGA 1059 0.4145 MMKGSKRLAASEPNQVDTNERGFRNKRIMEGSLFDVHRAEPSQQPTAAAPPLDMKRAESSQQHVRALNTQFASWIQTQLKNHPDELWEDGVRDYLDHASSIMEKFSDVVNWLKANATKPENSAADAGAAFSGKKLLPELINKENKSFGEKTGSTPVSTATNFTSSWSPGLFSNSQSIFGFGNQSSAISNQSLSPSNHNASDDVDGESELEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSSDPADKDVWKDKGMGQLSIKCKEGVSKATKESKPTVVVRNEVGRILLNALLYPGIKTNPQKNSLVAIFHTSGNADGSGGDNDSVVARTFLIRMKTEDDRNKLASTIQEYSPVS 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1689 352 MobiDBLite consensus disorder prediction 188 222 - -
Aed11g1689 352 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP50 7 350 - -
Aed11g1689 352 Gene3D - 138 350 IPR011993 -
Aed11g1689 352 SUPERFAMILY PH domain-like 219 349 - -
Aed11g1689 352 PANTHER RAN BINDING PROTEIN 7 350 IPR045255 -
Aed11g1689 352 MobiDBLite consensus disorder prediction 19 34 - -
Aed11g1689 352 SMART ranbd_3 209 348 IPR000156 GO:0046907
Aed11g1689 352 Pfam RanBP1 domain 217 347 IPR000156 GO:0046907
Aed11g1689 352 ProSiteProfiles Ran binding domain type 1 profile. 219 352 IPR000156 GO:0046907
Aed11g1689 352 MobiDBLite consensus disorder prediction 1 60 - -
Aed11g1689 352 CDD RanBD_NUP50 221 348 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1689 K14295 - gmx:100816975 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1689 11 20604887 20609764 Aed11g1689 11 20604887 20609764 ECH