Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1684 ATGGGTGCAGAAGCAAATGGCGGTGAGAAGGAATTGAAATTTCTGATCTACGGTCGAACCGGTTGGATTGGTGGTCTATTGGGTAAGCTGTGCGAAGAGCGCGGGATTCAATATGAGTACGGCACCGGTAGGCTCGAGAACCGGTTGTCGTTAGAGGCGGACATAACGGCGTTGAAGCCCAGCCACGTGTTCAATGCCGCGGGTGTCACGGGTAGACCCAATGTGGACTGGTGCGAATCTCATAAGGTTGAAACCATCCGAACCAACGTCGTCGGCACTCTCACCCTCGCCGACATCTGCCGCCAAAATGGCCTCATCCTCATCAACTACGCCACCGGCTGCATCTTCGAGTACGATTCTTCCCACACTCTCGGATCCGGCCTCGGCTTCAAGGAACAAGACACTCCCAATTTCATCGGATCCTTCTACTCCAAGACCAAAGCCATGGTGGAGGATCTGCTTGGGAACTACGAGAACGTGTGCACGCTGCGTGTCAGGATGCCGATATCCTCGGATTTGTCGAACCCGCGGAATTTCATCACCAAGATCAGTCGATACGACAAGGTTGTCGACATTCCGAACTCCATGAGCATACTGGACGAGCTGCTCCCAATCTCGCTGGAGATGGCGAAGAGGAATCTGACTGGGATCTGGAATTTCACGAACCCTGGAGTGGTAAGCCACAACGAGATATTAGAGATGTACAGGGAGTACGTGGATCCGAATTTTACATGGAAGAACTTCAGTCTGGAGGAGCAGGCTAAGGTGATTGTTGCCCCTAGAAGCAACAACGAGCTTGACGCCTCTAAGTTGAAGAAAGAGTTTCCTCAACTTTTGTCCATCAAGGACTCCCTCGTTAAGTACGTCTTCCAGCCCAATCACAAAATAACATAA 894 0.5145 MGAEANGGEKELKFLIYGRTGWIGGLLGKLCEERGIQYEYGTGRLENRLSLEADITALKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADICRQNGLILINYATGCIFEYDSSHTLGSGLGFKEQDTPNFIGSFYSKTKAMVEDLLGNYENVCTLRVRMPISSDLSNPRNFITKISRYDKVVDIPNSMSILDELLPISLEMAKRNLTGIWNFTNPGVVSHNEILEMYREYVDPNFTWKNFSLEEQAKVIVAPRSNNELDASKLKKEFPQLLSIKDSLVKYVFQPNHKIT 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1684 297 Gene3D - 4 297 - -
Aed11g1684 297 CDD dTDP_HR_like_SDR_e 13 285 - -
Aed11g1684 297 PANTHER TRIFUNCTIONAL UDP-GLUCOSE 4,6-DEHYDRATASE/UDP-4-KETO-6-DEOXY-D-GLUCOSE 3,5-EPIMERASE/UDP-4-KETO-L-RHAMNOSE-REDUCTASE RHM3-LIKE 6 294 - -
Aed11g1684 297 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 6 294 - -
Aed11g1684 297 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 289 IPR036291 -
Aed11g1684 297 Pfam RmlD substrate binding domain 13 182 IPR029903 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1684 Aed-Chr11 20560232 20561757 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1684 K12451 - gmx:100787499 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1684 11 20560232 20561757 Aed11g1684 11 20560232 20561757 ECH