Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1680 ATGGGTACTCTAACTACTGTTCCTGTGCTCCCTTCTAAGCTTAACAAGCCTTCGCTTTCTCAGCGCCACAATTCTAACAAACCCTACTACGATAGACAGGTCGGCAAGAAGAACAAAGCAATGGTTCCTGTTGCTAGGTTGTTCGGGCCAGCCATATTTGAATCCTCAAAGCTGAAGGTTTTGTTCTTAGGAGGAGTGGATGAAAATAAACACCCAGGAAATCTCCCAAGGACTTATACGCTAACCCACAGTGATATGACCGCTAAACTCACCTTGGCAATCTCTCAAACCATAAATAATTCTCAGGTGTTGAAGGCAGTCGTTCACGGCGATGAAAACCTATTCAACAACTACCCAGAATTGCAGGATGCCTTGGTTTGGGTTTACTTTCACTCAAACATTCCAGAATTCAACAAGGTGGAATGTTGGGGTCCACTGTTTGAAGCGTCAGCACCCACGGGTGGGGCCCAGGAAGAGTGTAAGCAAGAAACACTTCCAAGTAGTGAGGGGTTGGCAATTCCACAGCCATGCCAAGAAGAATGTGAATGTTGTTTTCCCCCGCTGACGTTAAGCCCAATTCAGTGGTCTCAACAAGTTCCCAGTCACCATTACGAAACTTGTGATGGGATTGAAACCCAACAAAATCTATAA 651 0.4547 MGTLTTVPVLPSKLNKPSLSQRHNSNKPYYDRQVGKKNKAMVPVARLFGPAIFESSKLKVLFLGGVDENKHPGNLPRTYTLTHSDMTAKLTLAISQTINNSQVLKAVVHGDENLFNNYPELQDALVWVYFHSNIPEFNKVECWGPLFEASAPTGGAQEECKQETLPSSEGLAIPQPCQEECECCFPPLTLSPIQWSQQVPSHHYETCDGIETQQNL 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1680 216 PANTHER PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED 1 103 - -
Aed11g1680 216 PANTHER PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED 103 208 - -
Aed11g1680 216 MobiDBLite consensus disorder prediction 1 28 - -
Aed11g1680 216 Pfam Staygreen protein 53 103 IPR024438 -
Aed11g1680 216 Pfam Staygreen protein 103 147 IPR024438 -
Aed11g1680 216 MobiDBLite consensus disorder prediction 1 29 - -
Aed11g1680 216 PANTHER PROTEIN STAY-GREEN 1, CHLOROPLASTIC 1 103 - -
Aed11g1680 216 PANTHER PROTEIN STAY-GREEN 1, CHLOROPLASTIC 103 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1680 Aed-Chr11 20526845 20528861 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1680 K22013 - gmx:732541 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1680 11 20526845 20528861 Aed11g1680 11 20526845 20528861 ECH