Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1677 ATGGCTAGCAAATTGGCCTTCACACTGACATACCCTGCTCCTACACCAATCTCTTCCTTGTCCTCCACTTCTGCTTCTCGACTCCACCTTCTTCATTTCAATGCCCGCCACCTATGCCTTCGCCGCAGGCTATTTCTGTTCTCCCCTAAGGCCACACCCAATCAAGACAAGGTTGAGGGAGATGCTGTTGTTGATAGTAAAATCCTACAATATTGTAGCATAGACAAAAAAGAGAAGAAATCAATTGGTGAAATGGAGCAAGATTTTCTTCAAGCACTGCAAGCATTCTATTACGAGGGGAAGGCTATTATGTCAAATGAGGAATTTGATAATCTTAAGGAAGAACTCATGTGGGAAGGGAGCGACGTCGTCATGCTAAGTTCTGATGAGCAAAAATTTCTTGAAGCATCTATGGCTTATGTGTCTGGAAAACCAATCTTGAACGACAAAGAGTTTGATGAGTTGAAACTCAGGCTAAAGATGGAAGGGAGTGAAATTGTGGCTGAGGGTCCACGATGCAGTCTTCGTAGTAGAAAGGTTTACAGTGACCTGTCTGTTGATTATTTAAAGATGTTATTGCTGAACGTCCCAGCGACTGTGATTGCACTAGGACTGTTCTTCTTCCTTGATGATGTGACTGGATTTGAGATCTCTTATCTGATAAATATTCCAGAGCCTTATAGTTTCATTTTAACTTGGTTTGCCGCTATTCCCTTTATTTTGTGGCTGGCTCAATCAATTACAAGGGCAATTGTACAAGATTTTTTGATTTTAAAGGGGCCCTGTCCCAGCTGTGGTACTGAAAATACCTCTTTCTTTGGGACTATACTGTCAATTTCAAGCGATTCCACCAACAACGTCAAATGTGAAAACTGTGAGACGAAAATGGTGTATGATTCAAAAACAAGATTGATTACATTACCAGAAGGAAGTAATGCCTAA 942 0.4119 MASKLAFTLTYPAPTPISSLSSTSASRLHLLHFNARHLCLRRRLFLFSPKATPNQDKVEGDAVVDSKILQYCSIDKKEKKSIGEMEQDFLQALQAFYYEGKAIMSNEEFDNLKEELMWEGSDVVMLSSDEQKFLEASMAYVSGKPILNDKEFDELKLRLKMEGSEIVAEGPRCSLRSRKVYSDLSVDYLKMLLLNVPATVIALGLFFFLDDVTGFEISYLINIPEPYSFILTWFAAIPFILWLAQSITRAIVQDFLILKGPCPSCGTENTSFFGTILSISSDSTNNVKCENCETKMVYDSKTRLITLPEGSNA 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1677 313 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 1 313 IPR039987 GO:0009535|GO:0009773|GO:0016730
Aed11g1677 313 PANTHER PGR5-LIKE PROTEIN 1A 1 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1677 Aed-Chr11 20513337 20516366 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1677 - - gmx:100785186 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1677 11 20513337 20516366 Aed11g1677 11 20513337 20516366 ECH
Aed6g0465 6 4049882 4054340 Aed11g1677 11 20513337 20516366 PCT