Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1676 ATGGGTACGGTGGTTCCGAGAGTTGAAAGCTTGGCGGGCAGTGGCATAAAGTGTATCCCGAAGGAATATGTGAGGCCTCAAGAAGAGTTGAACAGCATAGGGAACGTGTTTGAGGAGGAAAAGAAGGAAGGGCCACAAGTTCCGACTATTGACTTGAGAGAGATAAGTTCGGAAGACGAGGTTGTTAGAGCGAAATGTCGGGAGAAGCTGAAGAAAGCGGCGGAGGAATGGGGTGTGATGCACTTAGTGAACCATGGGATACCAGATGAGCTGCTAAACCGAGTGAAGAAAGCAGGGGAAGCATTCTTCGCTCTGCCGGTCGAGGAAAAGGAGAAGTATGCGAATGAGCAGGCGTCTGGGATGATTCAAGGCTACGGAAGCAAACTGGCCAACAATGCCAGTGGCCAACTCGAGTGGGAAGACTACTTCTTCCACCTTGCTTTCCCCGAGGACAAGCGCGACCTCTCCATCTGGCCAAAGAAACCCTCTAATTATACTGAGGTTACAAGCGAGTATGCAAAGCGACTGAGAGGGCTTGCGACTAAGATATTGGAGGCTCTGTCCATTGGATTGGGGCTGGAAGGAGGGAGGCTGGAGAAGGAAGTTGGTGGGATGGAAGAGCTTCTACTTCAATTGAAGATCAACTACTACCCAATTTGTCCCCAGCCAGAACTTGCTCTGGGAGTTGAAGCCCACACCGATGTAAGTTCACTCACTTTCCTCCTTCATAACATGGTGCCAGGTCTGCAGCTATTCTATGAAGGCAAATGGGTCACAGCAAAATGTGTCCCTGATTCCATTCTCATGCACATTGGCGACACCATTGAGATCCTCAGCAACGGAAAGTACAAGAGCATTCTTCACAGGGGGTTAGTGAACAAGGAAAAGGTTAGAATATCGTGGGCAGTGTTCTGTGAACCCCCAAAGGAGAAGATCATCCTGAAGCCACTTCCGGAGCTTGTCACTGAGACTGAACCAGCACGCTTCCCACCTCGCACTTTTGCTCAGCATATACACCACAAACTATTCAGGAAGGATCAGGAACTTCTCACAAATTGA 1059 0.4948 MGTVVPRVESLAGSGIKCIPKEYVRPQEELNSIGNVFEEEKKEGPQVPTIDLREISSEDEVVRAKCREKLKKAAEEWGVMHLVNHGIPDELLNRVKKAGEAFFALPVEEKEKYANEQASGMIQGYGSKLANNASGQLEWEDYFFHLAFPEDKRDLSIWPKKPSNYTEVTSEYAKRLRGLATKILEALSIGLGLEGGRLEKEVGGMEELLLQLKINYYPICPQPELALGVEAHTDVSSLTFLLHNMVPGLQLFYEGKWVTAKCVPDSILMHIGDTIEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKEKIILKPLPELVTETEPARFPPRTFAQHIHHKLFRKDQELLTN 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1676 352 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 348 - -
Aed11g1676 352 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 348 - -
Aed11g1676 352 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 208 307 IPR005123 -
Aed11g1676 352 SUPERFAMILY Clavaminate synthase-like 5 344 - -
Aed11g1676 352 Pfam 2OG-Fe(II) oxygenase superfamily 212 307 IPR044861 -
Aed11g1676 352 Gene3D - 3 350 IPR027443 -
Aed11g1676 352 Pfam non-haem dioxygenase in morphine synthesis N-terminal 47 160 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1676 Aed-Chr11 20510595 20512081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1676 8 337 Glycosyltransferase AT5G59530 29.341 1.44e-38 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1676 K05277 - gmx:547615 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1676 11 20510595 20512081 Aed11g1676 11 20510595 20512081 ECH