Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1669 ATGAGAGTGATAGTGCCTCTACAAGGCGTTGTCCAAGGCACAGGTGGTCTTTTCTGGGGTTCAGTCATTCCTTGTGCTCTCTTCTACTTTCTCCAGCTCTTTTTTAAAACCAAGACACGTCACCACCCTGACCCTGAGGAGGAGGAGGGGGATTCCACCACCACCACCACCACCACCACCACCTTCCACCGCTCTCTCTCTTCCAACCACAGGCACGCCACAGCAACTGCCTCTGCTTACGTATCTCCTCGTGCCAATTCCATAACCGCCGCTAACTCCCCTTACTTCCTAGGCTTGCACAAGGTTGCCGATGATCCCTACCACCAAACTCATTATCCTGACGGCATTATCCAACTTGCTTTGCACCAAAACACCCTATCTCTCGACTTGATTCAAGAATGGATTAGCCACAACGGAAGCGCTGCTATGTTGGGGACACCACGAGGCATTGCTCCTTACCAACCTCTTGATGGATTGATGGAGCTCAAAGTGGCTGTTGCCGGTTTCATGTCTCAAGTTTTGGAAAACCTGATTTTCTTCAACACCTCCCGAATGGTACTAACTGCAGGTGCCACTTCTGCCATTGAGATTCTAAGCTTCTGCCTAGCAGATCATGGAAACGCATTCCTTGTTCCCACGCCTCTTAGCCCTGGTTTTGACGGGGTTGTAAAATGGCGCACTGGCGTTGAGATAGTACCTGTTCCCTGCCGCAGCACTGATGACTTCAATTTAACTATAACTTCACTTGAGAGAACCTTTCATCAAGCAAAGATGCGTGGTCAAAAAGTTCGTGGAATTATAATAAGCAACCCCTCAAATCCTGCTGGCAAACTGTTGGATAGGGAAACACTGTTGGATCTTTTGGACTTTGCTAGAGACAAGAACATTCACATAATCTCTAATGAAATGTTTGCAGGCTCTTCTTATGGAAACCAAGAGTTTGTGAGCATGGCAGAAATCATGGAGGCAGAAGATCATGACCGGGACAGAGTTCATATCGTGTTTGGTTTGTCAAATGAGCTCTCTGTTCCAGGTTTGAAGGTGGGTGTAATCTATTCTTATAATGACAATGTCGTGGCTGCTTCTAGCAAATTGGCAAGGTACTCCACTGTGTCTGCCCCAACCCAAAGATTGCTCATCTCCATGCTTTCAGATACAGGTTTTGTGCAAAAGTTTATCGAGGTTAACAGATTGAGGCTGCGGAAAATGTATAATACATTTGTGGCAGGGCTGAAGCAGTTGGGGATTAAGTGCACTAGGAGCAGTGGTGGTTTTTGCTGCTGGGCTGACATGAGCAGCTTCATTCGCTCTTACAGTGAAAAGGGAGAGCTTGAGCTCTGGGATAGACTGTTGAATGTTGCTAAGATCAATGTTACCCCGGGATCATCATGTCACTGTATTGAACCTGGATGGTTTCGTTTTTGTTTTGCTACATCCACTGAAAAGGATGTTTCTGTACTGATGGAACGGATTCGGAGAATTGCTGATGCCACAACAAATGCACATAGTTGA 1512 0.4663 MRVIVPLQGVVQGTGGLFWGSVIPCALFYFLQLFFKTKTRHHPDPEEEEGDSTTTTTTTTTFHRSLSSNHRHATATASAYVSPRANSITAANSPYFLGLHKVADDPYHQTHYPDGIIQLALHQNTLSLDLIQEWISHNGSAAMLGTPRGIAPYQPLDGLMELKVAVAGFMSQVLENLIFFNTSRMVLTAGATSAIEILSFCLADHGNAFLVPTPLSPGFDGVVKWRTGVEIVPVPCRSTDDFNLTITSLERTFHQAKMRGQKVRGIIISNPSNPAGKLLDRETLLDLLDFARDKNIHIISNEMFAGSSYGNQEFVSMAEIMEAEDHDRDRVHIVFGLSNELSVPGLKVGVIYSYNDNVVAASSKLARYSTVSAPTQRLLISMLSDTGFVQKFIEVNRLRLRKMYNTFVAGLKQLGIKCTRSSGGFCCWADMSSFIRSYSEKGELELWDRLLNVAKINVTPGSSCHCIEPGWFRFCFATSTEKDVSVLMERIRRIADATTNAHS 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1669 503 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 296 319 - -
Aed11g1669 503 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 206 227 - -
Aed11g1669 503 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 362 385 - -
Aed11g1669 503 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 119 145 - -
Aed11g1669 503 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 184 204 - -
Aed11g1669 503 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 330 354 - -
Aed11g1669 503 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 260 284 - -
Aed11g1669 503 SUPERFAMILY PLP-dependent transferases 95 495 IPR015424 -
Aed11g1669 503 Pfam Aminotransferase class I and II 118 491 IPR004839 GO:0009058|GO:0030170
Aed11g1669 503 Gene3D - 139 385 IPR015421 GO:0003824
Aed11g1669 503 PANTHER AMINOTRANSFERASE ACS12-RELATED 2 498 - -
Aed11g1669 503 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 2 498 - -
Aed11g1669 503 Gene3D Aspartate Aminotransferase, domain 1 105 490 IPR015422 GO:0003824
Aed11g1669 503 MobiDBLite consensus disorder prediction 52 70 - -
Aed11g1669 503 MobiDBLite consensus disorder prediction 40 70 - -
Aed11g1669 503 CDD AAT_like 153 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1669 Aed-Chr11 20477588 20484226 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1669 K14270 - gmx:100783490 898.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1669 11 20477588 20484226 Aed11g1669 11 20477588 20484226 ECH