Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1662 ATGTCAGCAACATGTAAACTAGAAGACAACAACAACAACAACCTAAGCTTAAACGATAAAAGCAACCAAATCCAAAAATGGCCTGCGAACCTAGTGAAGATGGTGGTGGCAGAGCTAAGAGTTCAACGAGGAATAGGCCTGCCAATGATGGGCATGAATTTTGCCTGGTTTGCCAAGACAGCCATCACAACAGCATTCTTAGGCCGTCTTGGGGAGCTGAGTTTAGCAGGTGGAGCTCTCGGGTTCACTTTTGCTAACGTCACTGGCTTCTCCCTCCTCAATGGTCTTTGTGGTGCCATGGAACCCATTTGCGGACAGGCTCATGGCGCCAAAAACTCAAGCCTCCTTCACAAGACCCTTCTCATGACAACCTCATTGTTGCTATTTGCATCACTTCCCATCACTTTCTTGTGGCTTCATGTTGACAAAATCTTGATTCTTTTTGGCCAGCAGCAAGACATCTCCACTGTGGCCAAGACCTATGTCTCATGTCTCATACCTGATTTGTTTATCACCTCACTCTTCTGTCCCTTAAAAGCCTACTTGAGCTCTCAAACCATAACTCTTCCCACCATGTTTTCTTCGGCTGTGGCACTGGCTTTCCACGTACCCATTAACATAGTGCTCTCAAAGACCATGGGCCTCAGAGGAGTTTCCATGGCAGTTTGGATAACTGATCTTATTGTTGTGCTTCTGCTTGCTATCTATGTTGTGATTCTTGAGAACAAAAAGGGAAGCATGTGGAAGGAAGGAGGGTGGTGGGATCAGAGCATCCAAGATTGGATTAGGCTGCTCAAGCTTTGTGGATCATGCTGCCTCAACACATGCCTTGAGTGGTGGTGCTATGAGATTCTTGTTCTGCTTACTGGCCACCTCACAAATGCTAAGCAAGCACTCGGAGTTTTGTCCATTGTCATCAACTTCGATTATTTGCTTTACTCAGTCATGTTGTCACTGGCCACTTGTGTTTCCACGCGTGTCTCAAATGAGCTTGGTGCGAACCAAGCTGCTCTTGCTTACCGATCAGCGTGTGTGTCTCTAGCAATGGGCTTTATCTCTGGTTGCATAGGTAGCTTGGCGATGGTGGCTGCCAGGGGAATTTGGGGGCCACTGTTTAGCCATGATATGGGAATTATAAAGGGAGTAAGGAAGACAATGTTGCTGATGGCTCTGGTGGAAGTGTTTAATTTTCCGTTGGCAGTTTGTGGAGGCATAGTTCGAGGGACAGCACGACCCTGGTTGGGCATGTATGCGAATCTAGGTGGATTTTATTTCCTGGCACTGCCACTTGGTGTTGTTTTTGCCTTCAAGCTCCGCTTTGGCCTTGTTGGACTCTTAATTGGGCTTCTTACTGGTATTGTTACCTGCTTGACGCTGTTATTGGTATTTATTGCGCGGTTAAACTGGGTCCAAGAAGCTGCCAAGGCACAAGCACTAACTGCCCAAGACCAGGTTAAGGAACTCTCCAGATATGACGACGCTCATAAAAAAGATGTAGTGTAA 1503 0.4677 MSATCKLEDNNNNNLSLNDKSNQIQKWPANLVKMVVAELRVQRGIGLPMMGMNFAWFAKTAITTAFLGRLGELSLAGGALGFTFANVTGFSLLNGLCGAMEPICGQAHGAKNSSLLHKTLLMTTSLLLFASLPITFLWLHVDKILILFGQQQDISTVAKTYVSCLIPDLFITSLFCPLKAYLSSQTITLPTMFSSAVALAFHVPINIVLSKTMGLRGVSMAVWITDLIVVLLLAIYVVILENKKGSMWKEGGWWDQSIQDWIRLLKLCGSCCLNTCLEWWCYEILVLLTGHLTNAKQALGVLSIVINFDYLLYSVMLSLATCVSTRVSNELGANQAALAYRSACVSLAMGFISGCIGSLAMVAARGIWGPLFSHDMGIIKGVRKTMLLMALVEVFNFPLAVCGGIVRGTARPWLGMYANLGGFYFLALPLGVVFAFKLRFGLVGLLIGLLTGIVTCLTLLLVFIARLNWVQEAAKAQALTAQDQVKELSRYDDAHKKDVV 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1662 500 CDD MATE_eukaryotic 38 475 IPR045069 GO:0042910|GO:1990961
Aed11g1662 500 PANTHER MULTIDRUG RESISTANCE PROTEIN 27 484 - -
Aed11g1662 500 TIGRFAM matE: MATE efflux family protein 48 445 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed11g1662 500 Pfam MatE 271 432 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed11g1662 500 Pfam MatE 48 207 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed11g1662 500 PANTHER PROTEIN DETOXIFICATION 56 27 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1662 Aed-Chr11 20435646 20437148 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1662 K03327 - gmx:100804083 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1662 11 20435646 20437148 Aed11g1662 11 20435646 20437148 ECH