Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1660 ATGGAGTGGCCTGCCTGTACGGACGAATATGAAAAGCTCATAATACGGATGAGCACTCCCAGGGTTGTCATTGACAATACCGTTTTCTCCTCAGCTACGCTAGTCAAGGTTGACAGCGCCAGAAGGCATGGTATTCTATTGGATGCCGTAGAAGTGCTCACTGACCTGAACCTTTCAATTAAGAAAGCCTATATATCTGCTGATGGCAAGTGGTTCATGGATGTTTTTCATGTCACTGATCAAAATGGAAACAAGATAATGGACGAGAGTGTTCTAAAATATATTGAACAGTCACTGGGGAACATTCACTATGGGAGAACCAACCGCTCTAATGGTCTCACTGCATTGGAATTAACAGGAACTGACCGAGTTGGTCTTTTATCCGAAGTGTTTGCTGTACTGGCTGATCTTCAATGCAATGTGGTTGAGGCCAAGGTTTGGACTCACAATGGCCGTATTGCCTCCTTAATCTATGTAAAAGATTGCAGCTCTGGGTCTGCTATTGAGGACTCTCAGAAAATTGATAAGATTGAATTGCGCTTAAGAAATGTTTTGAAGGGAGACAATGACATTAGAAGTGCAAAAATTTCTGTCTCTTTAGCCGCGATGCACACTGAAAGACGGCTACATCAATTGATGTTCGCTGACCGTGATTATGAGAGGGCTCCTATTCTTAAATTGACTTCTGATAACCCATTGGTGACCGTCCAGAATTGGGAAGGAAGGGGTTATTCAGTTGTGAATGTTCAGTGCAAAGATCGAATCAAGCTATTATTTGACATTGTTTGTAATTTGACAGACATGGAATATGTTGTATTCCATGCAACTATTGACACTAATGGTGACCAAGCTTACTTGGAATTTTATATAAGACACAAGGATGGCACTCCAATTAGTTCAGAGCCAGAGCGTCAACGTGTAATTCAATGCTTAAAAGCTGCTGTAGAGAGAAGGGCATCTGAGGGTGTTGTTCGATTAGAGTTATGCACAGAAGACAGGCAGGGGCTTCTAGCAGAAGTAATGAGAACTTTCCGAGAGAATGGGCTCAATGTGACCAGGGCTGAGATATCTACAATAGGGAATATGGCTACAAATATATTCTATGTAACGGATGCGATTGGAAATCAAGCTGATTCTAAAATTATCGAATCTGTTAGGAAGAAAATTGGGTTAAGCAATTTAGAAGTGAAGGAGTTGCCATTGATAAATCATCAGGAGGCAGAGAGAGAGGATGAAGCAGTTGGAATTGGTGGGGCAGTGTTGTTATCCATTGGGAGCCTTGTGAGAAGGAATCTGTACCATTTGGGACTAATCAAATCCTGTTCTTAA 1329 0.4176 MEWPACTDEYEKLIIRMSTPRVVIDNTVFSSATLVKVDSARRHGILLDAVEVLTDLNLSIKKAYISADGKWFMDVFHVTDQNGNKIMDESVLKYIEQSLGNIHYGRTNRSNGLTALELTGTDRVGLLSEVFAVLADLQCNVVEAKVWTHNGRIASLIYVKDCSSGSAIEDSQKIDKIELRLRNVLKGDNDIRSAKISVSLAAMHTERRLHQLMFADRDYERAPILKLTSDNPLVTVQNWEGRGYSVVNVQCKDRIKLLFDIVCNLTDMEYVVFHATIDTNGDQAYLEFYIRHKDGTPISSEPERQRVIQCLKAAVERRASEGVVRLELCTEDRQGLLAEVMRTFRENGLNVTRAEISTIGNMATNIFYVTDAIGNQADSKIIESVRKKIGLSNLEVKELPLINHQEAEREDEAVGIGGAVLLSIGSLVRRNLYHLGLIKSCS 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1660 442 CDD ACT_ACR_1 32 100 - -
Aed11g1660 442 Gene3D - 113 187 - -
Aed11g1660 442 CDD ACT_ACR_2 114 187 - -
Aed11g1660 442 SUPERFAMILY ACT-like 111 171 IPR045865 -
Aed11g1660 442 SUPERFAMILY ACT-like 30 97 IPR045865 -
Aed11g1660 442 SUPERFAMILY ACT-like 322 396 IPR045865 -
Aed11g1660 442 ProSiteProfiles ACT domain profile. 325 404 IPR002912 -
Aed11g1660 442 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 440 IPR040217 -
Aed11g1660 442 CDD ACT_ACR_3 244 318 - -
Aed11g1660 442 Gene3D - 324 409 - -
Aed11g1660 442 ProSiteProfiles ACT domain profile. 115 199 IPR002912 -
Aed11g1660 442 PANTHER [PROTEIN-PII] URIDYLYLTRANSFERASE-RELATED 1 440 - -
Aed11g1660 442 ProSiteProfiles ACT domain profile. 34 109 IPR002912 -
Aed11g1660 442 Pfam ACT domain 326 385 IPR002912 -
Aed11g1660 442 Pfam ACT domain 116 168 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1660 Aed-Chr11 20424599 20428821 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1660 - - gmx:100806283 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1660 11 20424599 20428821 Aed11g1660 11 20424599 20428821 ECH