Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1643 ATGAAATTGAATCTGCTGCCAATACAACAGTTGGACATTGTAGCTGAGTTTGAGATAGAAAAGGAAGCCTTGGAGAAGTCAGGCGAGTCCAATAAAGAGTACAAGTGTAGTAGTAGTGGTGGAGCAGCTGAACGTGGTGCAGTAGGACCTTTTGGTCTTCTAGTTTTGGCAGATGATGATCTTTCTGAATACACTCCCACATACTTTTATGTCGTCAAGGGAAGCGATGGACAACTTCAAACTTCCTTCTGCTCTGATCAATCAAGGTCTTCTCTTGCAACTGATGTTAGTAAGAAAATCTTTGGAAGCTTGGTTCCAGTACTAAAAGGCGAAAAATTGTCTGTAAGGATATTGGTGGACCATTCTATAGTGGAAAGTTTTGCTCAAGGTGGAAGGAGGAGTGTAACATCTCGAGTTTATCCAACGAAGGCAATCTATGGAGCTACTAGATTGTTTTTATTCAATAATGCTACTGAGGTCACTGTGACTGCTTCAGTTAAGGTTTGGCAAATGAATTCTGCATTCATACGTCCGTTCCACCCTGACCAGAGGAATTCAGTTTAA 564 0.4131 MKLNLLPIQQLDIVAEFEIEKEALEKSGESNKEYKCSSSGGAAERGAVGPFGLLVLADDDLSEYTPTYFYVVKGSDGQLQTSFCSDQSRSSLATDVSKKIFGSLVPVLKGEKLSVRILVDHSIVESFAQGGRRSVTSRVYPTKAIYGATRLFLFNNATEVTVTASVKVWQMNSAFIRPFHPDQRNSV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1643 187 SUPERFAMILY Concanavalin A-like lectins/glucanases 7 175 IPR013320 -
Aed11g1643 187 Pfam Glycosyl hydrolases family 32 C terminal 9 170 IPR013189 -
Aed11g1643 187 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 3 180 - -
Aed11g1643 187 Gene3D - 1 171 - -
Aed11g1643 187 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 3 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1643 Aed-Chr11 20339802 20340571 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1643 10 183 Glycoside Hydrolase AT1G62660 63.687 8.51e-76 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1643 K01193 - gmx:100798772 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1643 11 20339802 20340571 Aed11g1643 11 20339802 20340571 ECH