Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1573 ATGGGTCGGAGGAACAATGAACCAAACTCCATTCTCTCACACCGTTTGATCCTTCCCTTGGTGTGTTTCGCGTCGTGTGCTTTGGTCTACGCGTTCCTCTCTGCGGTGCTTACTAACAGTAACAGCAGAAGCAGAGTTTCTGAGTTTGAGAGGTTGGTTGAAGATGGTGTGGCGGCGGAGAATGGAGGAGGGTGCTGTAGGGGGATTGAGAATTTGGAGCTTTGGGGTGCTGCAGTGAAGTGGGGTTCCGAGTTTAAATTCAACACTTCTGAAGGATGCTGCAACGCCTGCAAATCCATGTGTTCTGGGAAAGATGGCCCTTGCCTCTGTGATACTTGGGTCTTTTGTGGGGATCGTAAGTCTTGTGGATCCAAGTTCGGTGAGTGTTGGTTGAAGAAACAGAAGGACAGCTTAGCACCTGAACGGCAAGAAGGAGCACCTCCAACGGAAGTGGTTGGTTGGACTTCTGGTCTAATCTTTGGGCAAGGAGAGTTGATTCTGCGCTGTGAGGTGTACAATATGGATCTAATTGAAGTAGTGAGGGGTATTATTGGACTGGAAACTGGATATGGAACTCTTCATATTAAACTTTTACCTGACTGTGCCCCACACTCTGTTGCCTACATTCTAGAACTGTTAGCTTTGCACCATTGTGCTGGCTGCCAATTTTACCGTGCAGAGAGTCGAGGTCAATCATGGGATTCAGAAGGAAACCATATAGAAAATGCTGGTGTTGGTCCCCCTTATGCATTAATTCAAGGGACACTGGAAGCACAAGGCACACCATTCAATAAACTTCCAGTGGAAGAGTGTCCAACCCTTAGAAGGGGTTCAGTTGCTTGGATTGGTTCTGGCCCTGAATTCTTCATTAGTCTAGCTGACCATTCTGAGTGGAAACATGAATACACTGTCTTTGGTTCTGTTCTTCCAGAAGACATGCATATTGCTGAGAAAATCACTACACTTCCCACAATACCTGATGTGTGGAACAATGTTAACGTCACCGTTTTGGAAAAACCTGTTCCCTTGTTGCTCCGAAGAATCAAGAAAAGCCACATAGATGAAATTTGA 1071 0.4622 MGRRNNEPNSILSHRLILPLVCFASCALVYAFLSAVLTNSNSRSRVSEFERLVEDGVAAENGGGCCRGIENLELWGAAVKWGSEFKFNTSEGCCNACKSMCSGKDGPCLCDTWVFCGDRKSCGSKFGECWLKKQKDSLAPERQEGAPPTEVVGWTSGLIFGQGELILRCEVYNMDLIEVVRGIIGLETGYGTLHIKLLPDCAPHSVAYILELLALHHCAGCQFYRAESRGQSWDSEGNHIENAGVGPPYALIQGTLEAQGTPFNKLPVEECPTLRRGSVAWIGSGPEFFISLADHSEWKHEYTVFGSVLPEDMHIAEKITTLPTIPDVWNNVNVTVLEKPVPLLLRRIKKSHIDEI 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1573 356 Gene3D - 175 340 IPR029000 -
Aed11g1573 356 SUPERFAMILY Cyclophilin-like 180 336 IPR029000 -
Aed11g1573 356 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 186 329 IPR002130 GO:0000413|GO:0003755
Aed11g1573 356 PANTHER EXPRESSED PROTEIN 1 351 - -
Aed11g1573 356 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASES 1 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1573 Aed-Chr11 19883472 19893617 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1573 - - gmx:100820360 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1573 11 19883472 19893617 Aed11g1573 11 19883472 19893617 ECH