Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1563 ATGGCGGAATCGGTTGAGCTTCCGAGTCGGTTAGCAATCCTTCCTTTCAGGAACAAAGTCCTTTTACCTGGCGCCATCATCCGAATTCGTTGCACTTCCCCCACCAGTGTCAAGTTGGTGGAACAAGAACTTTGGCAGCGAGAAGAGAAGGGATTGATTGGCATCTTACCAGTACGTGATGCTGCTGAAATTAAGCCACCGGATCCGGTTTTATCTCAAGCTCGAGCACTACACTTATCAAGGGGAGTGGAGAAACCAAGTGGGAGAGTCACATATATTGTTGTTCTTGAAGGCCTGTGCAGATTTAGCATCCAGGAACTAAGCACGAGAGGAACATACCATACTGCAAGGATCTCATCTCTTGAGATGACTAAGACTGAGATGGAACAGGTGGAGCAAGACCCAGATTTCATAATGTTATGTCGCCAATTTAAAGCAACTTCCATGGAGCTTATTTCTATTCTGGAGCAGAAACAAAAAACTGGTGGAAGGACAAAAGTTCTTTTGGAGACTGTTCCAGTTCACAAGTTGGCTGATATATTTGTTGCTAGCTTTGAGATAAGTTTTGAACAACAGCTATCAATGTTGGATTCAGTTGACCCTAAACTGAGGCTTTCAAAAGCGACAGAATTGGTTGATAGGCACTTGCAGTCAATACGTGTAGCTGAGAAAATTACATAA 681 0.4361 MAESVELPSRLAILPFRNKVLLPGAIIRIRCTSPTSVKLVEQELWQREEKGLIGILPVRDAAEIKPPDPVLSQARALHLSRGVEKPSGRVTYIVVLEGLCRFSIQELSTRGTYHTARISSLEMTKTEMEQVEQDPDFIMLCRQFKATSMELISILEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEQQLSMLDSVDPKLRLSKATELVDRHLQSIRVAEKIT 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1563 226 Gene3D - 1 122 IPR046336 -
Aed11g1563 226 Pfam ATP-dependent protease La (LON) substrate-binding domain 11 214 IPR003111 -
Aed11g1563 226 Gene3D - 137 226 - -
Aed11g1563 226 PANTHER ATP DEPENDENT LON PROTEASE FAMILY MEMBER 1 65 IPR027065 GO:0004176|GO:0004252|GO:0005524|GO:0030163
Aed11g1563 226 SUPERFAMILY PUA domain-like 10 213 IPR015947 -
Aed11g1563 226 ProSiteProfiles Lon N-terminal domain profile. 11 214 IPR003111 -
Aed11g1563 226 PANTHER LON PROTEASE HOMOLOG 2, PEROXISOMAL 73 226 - -
Aed11g1563 226 PANTHER LON PROTEASE HOMOLOG 2, PEROXISOMAL 1 65 - -
Aed11g1563 226 PANTHER ATP DEPENDENT LON PROTEASE FAMILY MEMBER 73 226 IPR027065 GO:0004176|GO:0004252|GO:0005524|GO:0030163
Aed11g1563 226 SMART lon_5 10 214 IPR003111 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1563 Aed-Chr11 19764199 19771749 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1563 K01338 - gmx:100796650 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1563 11 19764199 19771749 Aed11g1563 11 19764199 19771749 ECH