Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1556 ATGTTACAGGAAATATCTTTCTTCACTGGAGGTAATGGGGTTGGTCTAACATTAGTCTTGCATTTTCTTTGGGCAATTTTTGAAGACGTGAAGCTTCAAAACACAGAAGACCAACCTGGTTCCACTCTTACAACATACACAATGTTGGTCTTTCAAGCAAAATGCATTAAACACATGGAAGCTTTTACTCAAAGGTGTATATCTAGATGGTCCGTTACACTTTATGCACGTTACTCTGATACTCCTCGGAAAAAGTCTAAGCTTGCTCCTTTACAGGAAAGAAGAATGATGGATCAATGTAAGATATTTGCAAAAGCAGGTGATGGAGGTAATGGTTGCTCCAGCTTACGCAAGGGAAGACCTGATGGTGGCAATGGGAGGAGAGGTGGTGATGTGATTCTGAAATGCTCTCCCAGAGTTTGGGACTTCAGTGGTTTGCATCGTCACCTGATAGCTGAGAAAGGAGGACCTGGATCATCAAAAAGGTTGATAGGTAGCAGGGGTGCTGATAAGGTTGCCCATGTACCGATTGGCACTGTACTTCATCTTGTTAATGGTGATATTCCTTTTGTTGTAAAAACTCAATCCTCAACAAATGTAGACCCTTGGGAGATTCCTGGGGCACTTGTTGATGATTTTCCTAACCCCGGCAATGGTTCTACCTCCAGTGTTACTAGTGGGGAAGTCAAAGCCATACATTCTATTGGCTGCTCCTCGTCACAAGATGAAGAAACAAATGTTAAGGAATCTGAAAAATCAAGACAAGTTGCATCAACAAATGTATTTTCTCAACTCTCCACTTCTAATGGTGCTCCTGAATTTGGAACAGAGGATATAGGAGAGAAACAAGAGATACTATACAATGTTGTTAACAGAAGAAGGTCAACAAATTGTCATTGCTCGTGGAGGAGAGGGTGGTCTAGGCAATGCGTATTGTTCCAAAGACTCAAGGAAGCCTGTGACTATTGCATTTTCAAGCCAAAACATGACCCTGACGGTGTTCTCTCCTCTCTGCATGAAGGTTCAGCTTGTTCTGAGACTGTTCTTATATTAGAACTCAAGAGTATTGCTGATGTGAGTTTTGTAGGAATGCCTAATGCTGGTAAAAGCACTTTACTCGGGGCTATAACAAGGGCTAAGCCGGCTGTTGGTGACTATGCCTTTATTACTCATAGGCCAAATTTGGGGAATCTAAACTATGATGATATCTCAATAACTGTGGCTGATATTCCTGGACTTATAAAAGGGGCACACCAAAATTGTGGACTTGGACATACATTTCTACGCCACATAGAATGCACAAAGGTTCTTGCTTATGTGGTAGACTTGGCTGCCGCTTTAAATGGAAGAAAGGGAATTCCACCATGGGAACAGTTGAGAGACTTAATTCTTGAGCTAGAGTACCATCAGGACAGTTTATCCAATTGGTCGTCCTTGATAGTTGCAAATAAGATTGATGAGGAAGGTGCAGATGAAGTGTATGAAGAGTTAAAGAGAAGGGGCCAGTGTGTGCCCATCTTTCCTGCGTGTGCTGTTTTGGGGGAAGGGATAGCAGATCTTAAAGCTGGCCTTAAAACGCTTGTCAGGCTGAAATGTCATCTAAACTTCACTTTGATCAAATTTTGCTTGCTTAGATTATTATTAAGAACTCTCTTGTAA 1659 0.4177 MLQEISFFTGGNGVGLTLVLHFLWAIFEDVKLQNTEDQPGSTLTTYTMLVFQAKCIKHMEAFTQRCISRWSVTLYARYSDTPRKKSKLAPLQERRMMDQCKIFAKAGDGGNGCSSLRKGRPDGGNGRRGGDVILKCSPRVWDFSGLHRHLIAEKGGPGSSKRLIGSRGADKVAHVPIGTVLHLVNGDIPFVVKTQSSTNVDPWEIPGALVDDFPNPGNGSTSSVTSGEVKAIHSIGCSSSQDEETNVKESEKSRQVASTNVFSQLSTSNGAPEFGTEDIGEKQEILYNVVNRRRSTNCHCSWRRGWSRQCVLFQRLKEACDYCIFKPKHDPDGVLSSLHEGSACSETVLILELKSIADVSFVGMPNAGKSTLLGAITRAKPAVGDYAFITHRPNLGNLNYDDISITVADIPGLIKGAHQNCGLGHTFLRHIECTKVLAYVVDLAAALNGRKGIPPWEQLRDLILELEYHQDSLSNWSSLIVANKIDEEGADEVYEELKRRGQCVPIFPACAVLGEGIADLKAGLKTLVRLKCHLNFTLIKFCLLRLLLRTLL 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1556 552 Gene3D GTP1/OBG domain 92 249 IPR036726 -
Aed11g1556 552 SUPERFAMILY Obg GTP-binding protein N-terminal domain 96 187 IPR036726 -
Aed11g1556 552 PANTHER BNAA08G29050D PROTEIN 334 530 - -
Aed11g1556 552 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 76 212 IPR045086 GO:0003924|GO:0005525
Aed11g1556 552 Gene3D - 356 533 IPR027417 -
Aed11g1556 552 PRINTS GTP1/OBG GTP-binding protein family signature 424 442 IPR006073 GO:0005525
Aed11g1556 552 PRINTS GTP1/OBG GTP-binding protein family signature 380 398 IPR006073 GO:0005525
Aed11g1556 552 PRINTS GTP1/OBG GTP-binding protein family signature 407 422 IPR006073 GO:0005525
Aed11g1556 552 PRINTS GTP1/OBG GTP-binding protein family signature 359 379 IPR006073 GO:0005525
Aed11g1556 552 PANTHER BNAA08G29050D PROTEIN 76 212 - -
Aed11g1556 552 MobiDBLite consensus disorder prediction 237 259 - -
Aed11g1556 552 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 334 530 IPR045086 GO:0003924|GO:0005525
Aed11g1556 552 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 357 529 IPR031167 GO:0005525
Aed11g1556 552 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 358 527 IPR027417 -
Aed11g1556 552 ProSiteProfiles Obg domain profile. 94 356 IPR006169 -
Aed11g1556 552 CDD Obg 357 528 IPR031167 GO:0005525
Aed11g1556 552 Pfam 50S ribosome-binding GTPase 359 484 IPR006073 GO:0005525
Aed11g1556 552 Pfam GTP1/OBG 97 182 IPR006169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1556 Aed-Chr11 19710787 19713174 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1556 - - gmx:100808337 744.191