Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1555 ATGAATAGAAAAACAATCAGAGGGAACACATTTGTGACGGTTCAATCCGACGCTAGCAGCGACTCAAGTGCTGTCACGAAAGTGGATTCAGAGGGTGGAAGTTGCCCTTCGTGGAATGAGAAGGTTGTGATGGATGTGCCATTGCATGCAAGCTTCATAACAGTTGAAGTGAAGTGCAAAACGTCGTCATCGTCAGTGTCTAACAGTGTTGGCGTGGCACAAATACCGGTTTCTGATTTCATTGGAGGCTACATGCCCCAAAATCAGTTGCATTTCTTGAGCTATAGGTTGTGGGACGGTAAAGTTAGGAGAAATGGGGTTATAAACATTTCGGTGAGGGTGAAAGTGACAGAACATTCTTCTTGTAATTTTAATTCTATGTCACCGGTAACTGGGGTGCCCGTGGCAGGTAATGCCTCCACTGGAGTTGTCACAGGGATTCCTGCTGTTTGGTTAAACTACCAAAGAAATCTTTGA 477 0.4486 MNRKTIRGNTFVTVQSDASSDSSAVTKVDSEGGSCPSWNEKVVMDVPLHASFITVEVKCKTSSSSVSNSVGVAQIPVSDFIGGYMPQNQLHFLSYRLWDGKVRRNGVINISVRVKVTEHSSCNFNSMSPVTGVPVAGNASTGVVTGIPAVWLNYQRNL 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1555 158 Pfam C2 domain 9 82 IPR000008 -
Aed11g1555 158 PANTHER INGRESSION PROTEIN FIC1 5 121 - -
Aed11g1555 158 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 9 115 IPR035892 -
Aed11g1555 158 ProSiteProfiles C2 domain profile. 1 91 IPR000008 -
Aed11g1555 158 PANTHER - 5 121 - -
Aed11g1555 158 Gene3D C2 domain 2 115 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1555 Aed-Chr11 19708856 19709332 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1555 - - gmx:100500298 253.447