Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1552 ATGACGGCTTCTTCTGAGAACTGCGTCTCGAGCCAGAGTTCTCTCACCAGACTTGCTCCACTTGAAGCAGTGCTCTTTGATATAGATGGAACTCTTTGTGATTCTGATCCGCTCCACTACTATGCCTTCCGTGAAATGCTTCTAGAGATTGGCTTTAATGGAGGTGTTCCTATAACAGAGGAATTCTTTATTGAAACTGTTGCTGGCAAACACAATGATGATATAGCCTTGGCTCTCTTTCCTGGTGATCGGGAACGAGGTTTAAAGTTTGTAGATGATAAGGAAGCCATGTTCCGGAGATTGGCAACAGAGCAAGTGAAGCCTTTGAATGGCCTTGATAAAGTGAGGAAATGGATTGAAAATCATGGGTTGAAGAGAGCTGCAGTTACCAATGCTCCAAGAGAAAATGCAGAACTCATGATCTCACTACTTGGTCTCTCAGATTTCTTTGAGGCTGTTATTATTGGTGGTGAATGTGAACATGCCAAGCCTCATCCAGACCCCTACCTGAAAGGTCTTGAAGCTCTGAAGGCATCAAAGGACCACACATTTGTATTTGAGGATTCTGTTTCAGGGATCAAAGCTGGAGTTGCAGCTGGGATGCCTGTTATTGGTTTAGCTACTCGAAACCCGGAACATTTATTGATGGAAGCAAAACCTGCCTTTCTGATTAAGGATTATGAGGATCCAAAATTGTGGGCTGCTTTGGAAGAACTTGACAAGACTGGTGGTCGTTCAGTTTGA 744 0.4382 MTASSENCVSSQSSLTRLAPLEAVLFDIDGTLCDSDPLHYYAFREMLLEIGFNGGVPITEEFFIETVAGKHNDDIALALFPGDRERGLKFVDDKEAMFRRLATEQVKPLNGLDKVRKWIENHGLKRAAVTNAPRENAELMISLLGLSDFFEAVIIGGECEHAKPHPDPYLKGLEALKASKDHTFVFEDSVSGIKAGVAAGMPVIGLATRNPEHLLMEAKPAFLIKDYEDPKLWAALEELDKTGGRSV 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1552 247 Pfam Haloacid dehalogenase-like hydrolase 24 205 IPR041492 -
Aed11g1552 247 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 21 229 - -
Aed11g1552 247 CDD HAD_BPGM-like 23 208 - -
Aed11g1552 247 Gene3D - 22 230 IPR023214 -
Aed11g1552 247 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 21 32 IPR006439 -
Aed11g1552 247 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 119 132 IPR006439 -
Aed11g1552 247 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 150 166 IPR006439 -
Aed11g1552 247 SUPERFAMILY HAD-like 18 238 IPR036412 -
Aed11g1552 247 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 2 245 - -
Aed11g1552 247 SFLD Haloacid Dehalogenase 21 229 - -
Aed11g1552 247 Gene3D Putative phosphatase; domain 2 36 104 IPR023198 -
Aed11g1552 247 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN-CONTAINING PROTEIN SGPP 2 245 - -
Aed11g1552 247 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 95 205 IPR006439 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1552 Aed-Chr11 19695770 19702862 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1552 - - gmx:100802762 463.381