Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1342 ATGATGGCACGGGCCTCGTACTGCGTGAAGGAGAGTAAATGGTGTGTTGGTTGGGTTGAGAAATACTTCGATGATTGTCTCTGCAATCTGAAAGATGAAATCTCGTTTGGGTTCGGCTTCATAAGTCTTATATGTTGGGGAGTAGCAGAAATTCCTCAGATAATAACCAACTTTCGCTCGAAGTCCAGCCACGGTGTCTCCCTAGCCTTTCTTCTCACTTGGGTCGCAGGCGACATATTCAACCTCGTTGGTTGCCATCTGGAGCCAGCCACGCTTTACACAATCACCACGATCGTGTTAGTAGTTCAAAGTTTCTATTATGACTACATCTATAAACGGGGCAAGCGTCATCGGAAGATCAACATCGATGAGGCACGTGCAGGTCATGAAGAAAAAGAAGAGAAAAAAGCTTTGAGACCGAAACCAGGCCGCGATACTGGGATTCTAATACAAAATGACGGACCCAAAGAAACGCCTCAACGGGATTACTACTATAGGTCAGCGAGATCTTTGGCTGCTAATGATACTCCTCCTCCATTTGGTACCTACTTGAGAGCTGCTAAAAGTGTCCCTTCAGCTGTCATGGAAATGAACAACGATTCATCTTCTGATGATGAGGCTGCGGCGCCATCTCCACTCTCTGTAACACAGCCTAGACCCATCCCACGTTCTGTCCCTGCTAGCTATGGAACTTTTCTTGCAGTATCTATGAACTTGCCGCGGCAGGGTAATGCTTTGAATGGGAGAAAACTACTCTTGCAGTTGCAGGAGCAAAATATGCACAGTGCTTTGGGTCAATGGTTAGGATGGCTCATGGCTGTTATCTATATGGGTGGCCGGCTTCCTCAAATATGGTTGAATGGCTTAAATCCTCTAATGTTCATATTTGCATTGATCGCCAATGCCACTTACGTGGGAAGTATTCTGGTTCGAACTACCGAATGGGAAAGCATCAGACCTAATATGCCATGGCTGTTGGATGCCATAGTCTGCGTGGCATTGGACCTATTCATAATTTTGCAGTACGCCAACTATAGATACATTCGGAAGAAAACAGGAAGTGATGATGCTGATTATGGAGATTACAAAGAAGCTAGCAAAACTTTTGTGTCTTGA 1116 0.4534 MMARASYCVKESKWCVGWVEKYFDDCLCNLKDEISFGFGFISLICWGVAEIPQIITNFRSKSSHGVSLAFLLTWVAGDIFNLVGCHLEPATLYTITTIVLVVQSFYYDYIYKRGKRHRKINIDEARAGHEEKEEKKALRPKPGRDTGILIQNDGPKETPQRDYYYRSARSLAANDTPPPFGTYLRAAKSVPSAVMEMNNDSSSDDEAAAPSPLSVTQPRPIPRSVPASYGTFLAVSMNLPRQGNALNGRKLLLQLQEQNMHSALGQWLGWLMAVIYMGGRLPQIWLNGLNPLMFIFALIANATYVGSILVRTTEWESIRPNMPWLLDAIVCVALDLFIILQYANYRYIRKKTGSDDADYGDYKEASKTFVS 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1342 371 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 5 368 - -
Aed11g1342 371 Pfam PQ loop repeat 264 315 IPR006603 -
Aed11g1342 371 Pfam PQ loop repeat 34 87 IPR006603 -
Aed11g1342 371 MobiDBLite consensus disorder prediction 196 220 - -
Aed11g1342 371 MobiDBLite consensus disorder prediction 196 210 - -
Aed11g1342 371 MobiDBLite consensus disorder prediction 126 142 - -
Aed11g1342 371 Gene3D - 265 359 - -
Aed11g1342 371 Gene3D - 37 124 - -
Aed11g1342 371 MobiDBLite consensus disorder prediction 126 160 - -
Aed11g1342 371 PANTHER PQ-LOOP REPEAT FAMILY PROTEIN / TRANSMEMBRANE FAMILY PROTEIN 5 368 - -
Aed11g1342 371 SMART ctns 278 302 IPR006603 -
Aed11g1342 371 SMART ctns 48 79 IPR006603 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1342 Aed-Chr11 18212405 18216077 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1342 K23678 - gmx:100815310 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1342 11 18212405 18216077 Aed11g1342 11 18212405 18216077 ECH
Aed11g1342 11 18212405 18216077 Aed7g0973 7 7450811 7455315 PCT