Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1339 ATGTTGACGTCACCGTCCGGCGATACCTTGGGTAAGGCCACGGCGGTGATGAATACCCTCAGCTTCTACCTTTCAGAGCACCCTGCAATCGTGAGGTTCCGATGGAGCCACGCTTTGTGCTGGGGCTCAACCTGGTCCTTCCTTATCTCATCAATCGTGGGTTACGTCGTCGTTTCGATATTTCTCCATCTAATATTAGCATTGCTTCTTCGACACGGCAAACCCGTTCCACTGGGACCCATCCCCGCGATCCATAGCCTCTCGATGTCCGTTATCTCCGCCACCATCTTCGCCGGACTTCTGATCTCCGCAGCCGCGGAAATCAAAGAGACTCGGTGGTTCTGGCGGCGCTCTAAGACCCCGCTCCAGTGGCTCCTATGTTTCCCCCTCGGGACGCGTCCCACCGGTCGTGTTTTCTTCTGGTCCTATGTTTTCTACCTGTCGCGTTTCCTTCACATGCTCAGCACCGTTCTCGTGGTTCTACGACGTCGTAAGCTGGTTTTCTTTCAGCTTTTTTACCATGCGATTTCCGCGTTCACGTCGTTCCTGTGGTTGGAGTTCTCGCAATCGTTCCAAGTTCTCGCGATCCTCTTCACCTCGCTGGCTTTCTCTGTTATGTACGGCTACCGGTTCTGGACCGCAATCGCGGCGCGTGGCGCATGCTTGCCACTCCTGCTTAGCTGCCAGATTGGGCTGCTTGGGTGCAACTTGGTTTGCCATGTTGGGGTGCTTTTGTTGCATTTTTTTACAGGGGGCTGTAACGGGATTGGCGCGTGGGTCTTCAATTCTGTGCTCAACGCTGCTATTTTGTTCCTGTTTGTTCATTTTTATGTTAGAGTGTATTTAGCAAGGAGGAGGCGGAATAATAATAATAACAACAACAACAACATGAACAACAACAACATGGCTCGTTCCTGCTCTGTCTTAGGCGCTGGAAAAGAAGCAGATAGTAATAAATTCAAGTCCAATTAA 972 0.5123 MLTSPSGDTLGKATAVMNTLSFYLSEHPAIVRFRWSHALCWGSTWSFLISSIVGYVVVSIFLHLILALLLRHGKPVPLGPIPAIHSLSMSVISATIFAGLLISAAAEIKETRWFWRRSKTPLQWLLCFPLGTRPTGRVFFWSYVFYLSRFLHMLSTVLVVLRRRKLVFFQLFYHAISAFTSFLWLEFSQSFQVLAILFTSLAFSVMYGYRFWTAIAARGACLPLLLSCQIGLLGCNLVCHVGVLLLHFFTGGCNGIGAWVFNSVLNAAILFLFVHFYVRVYLARRRRNNNNNNNNNMNNNNMARSCSVLGAGKEADSNKFKSN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1339 323 PANTHER GNS1/SUR4 MEMBRANE FAMILY PROTEIN 10 309 - -
Aed11g1339 323 Pfam GNS1/SUR4 family 43 288 IPR002076 GO:0009922|GO:0016021
Aed11g1339 323 PANTHER FATTY ACID ACYL TRANSFERASE-RELATED 10 309 IPR002076 GO:0009922|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1339 Aed-Chr11 18198632 18199603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1339 13 266 Acyl Lipid Metabolism Gene Families AT4G36830 64.202 1.86e-117 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1339 - - gmx:100782066 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1339 11 18198632 18199603 Aed11g1339 11 18198632 18199603 ECH
Aed11g1339 11 18198632 18199603 Aed7g0976 7 7479241 7480128 PCT