Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1333 ATGGGACTGAGTCGAACTCCAAGACATAATCCTGTTCTTCCAACCAAATCTCCAATTCTCAGTCGCACACATTCTCATTCTCAAACCATGAAAACAGCACAGATTTTTGGTGTGTCTCTCTCGCTCATTCTTATAAACCTGGCTGCTATTATGGAGCGTGCAGATGAAAATCTTCTTCCATCTGTCTACAAAGAAGTTAGTGAAACATTTAATGCTGGACCATCTGATTTGGGTTACCTCACATTCATAAGGAACTTTGTTCAGGGATTATCATCTCCTCTTGCTGGTATACTTGTTATCAACTACGATCGCCCAACAATTCTTGCTATGGGCACTTTCTGCTGGGCTTTATCTACAGCTGCTGTGGGTGTTTGCCACGATTTTATGCAGGTTGCGTTCTGGAGAGCAATAAATGGCTTTGGTCTGGCGATCGTGATTCCAGCACTCCAGTCTTTCATTGCTGATAGCTACAAGGATGGAGTGAGAGGAACCGGGTTTGGATTGCTTAGTCTCATTGGTAACTTAGGAGGCATAGGAGGTGGTGTTTTGGCTACTGTCATGGCTGGTCAACAGTTTTGGGGCATACAAGGATGGCGATGTGCCTTCATTTTGATGGCAACTTTGAGTGCATTAATTGGATTCCTTGTTTTACTATACGTTGTTGAGCCAAGAAAAAGATTTCCCACCACTCGTGATGCTAGTGAGAGTTCAGACAGGGATGACTCTATCTATAAAGCCAATGCTAGTGCTGCATCAATTTGGATGGAATCTTGGGCAGCCACAAAAGTTGTGATAAAAGTGAAAACATTTCAAATAATTGTCTTACAGGGCATTATTGGGTCACTGCCGTGGACTGCCATGGTGTTCTTCACAATGTGGTTCGAACTAATTGGTTTTGATAACAATACTTCAGCAACCCTCCTTAGTGTTTTCGCTGTTGGATGTGCTATGGGGTCCTTGATTGGTGGATCAATAGCTGATCAACTATCACAAGTGTACCCTTATTCTGCTCGTACCATGTGCGCACAGTTTAGTGCCTTTATGGGGATTCCATTCTCATGGTTTCTTCTTAAGGTTATCCCTCAGTCAGTGAGTAGTTTTCTTACCTTTTCTGTCACCCTTTTTTTAATGGGTCTAACTATCAGCTGGAACGGTGCGGCTGCAAATGCTCCTATGTTTGCTGAGGTTGTCCCTGTCAAACACCGTACCATGATTTATGCATTTGATCGAGCTTTTGAAGGCTCGTTTTCTTCTATTGCGGCTCCTCTCGTAGGGATTCTTTCTGAGAAAATGTTTGGATATAACTCAAAGGCTGTTGATCCCATCAAAGGATCTTCACCAGAGGCTCTTGCCTTGTCAAAGGGCCTTCTTTCCATGATGGCTATTCCATTTGGTCTGTGTTGTTTATGCTACACCCCTCTATATTGCATATTTAGAAAGGACCGCGAAAATGCTAGAATGCTTGCTGTGAAAGAGGAGGAGATGATGTGA 1491 0.4319 MGLSRTPRHNPVLPTKSPILSRTHSHSQTMKTAQIFGVSLSLILINLAAIMERADENLLPSVYKEVSETFNAGPSDLGYLTFIRNFVQGLSSPLAGILVINYDRPTILAMGTFCWALSTAAVGVCHDFMQVAFWRAINGFGLAIVIPALQSFIADSYKDGVRGTGFGLLSLIGNLGGIGGGVLATVMAGQQFWGIQGWRCAFILMATLSALIGFLVLLYVVEPRKRFPTTRDASESSDRDDSIYKANASAASIWMESWAATKVVIKVKTFQIIVLQGIIGSLPWTAMVFFTMWFELIGFDNNTSATLLSVFAVGCAMGSLIGGSIADQLSQVYPYSARTMCAQFSAFMGIPFSWFLLKVIPQSVSSFLTFSVTLFLMGLTISWNGAAANAPMFAEVVPVKHRTMIYAFDRAFEGSFSSIAAPLVGILSEKMFGYNSKAVDPIKGSSPEALALSKGLLSMMAIPFGLCCLCYTPLYCIFRKDRENARMLAVKEEEMM 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1333 496 CDD MFS_spinster_like 42 471 IPR044770 -
Aed11g1333 496 Gene3D MFS general substrate transporter like domains 265 493 IPR036259 -
Aed11g1333 496 Gene3D MFS general substrate transporter like domains 38 230 IPR036259 -
Aed11g1333 496 PANTHER SPINSTER 32 496 IPR044770 -
Aed11g1333 496 MobiDBLite consensus disorder prediction 1 21 - -
Aed11g1333 496 ProSiteProfiles Major facilitator superfamily (MFS) profile. 41 473 IPR020846 GO:0022857
Aed11g1333 496 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 32 496 - -
Aed11g1333 496 Pfam Major Facilitator Superfamily 47 379 IPR011701 GO:0022857|GO:0055085
Aed11g1333 496 SUPERFAMILY MFS general substrate transporter 42 484 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1333 Aed-Chr11 18168829 18172735 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1333 - - gmx:100812646 907.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1333 11 18168829 18172735 Aed11g1333 11 18168829 18172735 ECH