Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1330 ATGGAAGACACGCTTTCTGCGCTGAGGTCTTTGATGGCTTCTCACTCTCCACCGCTTGATGCCTTAGTTGTGCCCTCTGAAGATTATCACCAGAGTGAATATGTGTCCTCACGAGACAAGCGCCGCGAATTCGTTTCAGGCTTCACTGGAAGTGCCGGCTTGGCACTTGTAACAAAGAATGAAGCACTGCTGTGGACGGACGGGCGATATTTTTTGCAGGCTGAGCAAGAACTTAGTGCTCAGTGGAAGCTTATGCGTATTGGTGAAGATCCTGCTGTAGATATCTGGATGGCCGATAACTTGCCAAAAGAGGCATCCATTGGGGTTGACCCTTGGTGCATTTCAATTGACACTGCTCAAAGATGGGAGCGTGCTTTTGCCGAAAAACAGCAGAAGCTGGTTCAAACCACAAAAAATTTGGTAGATGAGGTTTGGGTAAATCGCCCACCAGCAGAGATTAATGCTGCTATTGTACAGCCACTGAAATTTGCAGGTCGCTCTGTTGCAGATAAGTTGAAAGATTTGAGAAAAAAGCTTGTACATGAGCAAGCCCGTGGGATAATTTTCACAGCACTTGATGAAGTTGCGTGGTTGTATAATATTCGTGGAAGTGATGTGGCCTACTGTCCTGTTGTTCATGCATTTGCTATTGTGACATCCAATTCTGCTTTCATTTATGTGGACAAACGAAAGGTTTCTCTTGAGGTACAAGCTCATTTAGTGGATAATGGAATTGAAATTCGAGAGTATACAGCCATAAGCTCTGATGCAACATTGCTTGCAACTGATGAGCTTGATACTGTATCTACTGCCAAGGTTGCTTTAGCTGAAACAGGGGCCAGAAAAATTCCTAGTGAAACTAACAAGAGTGTAAATGGTGAACATCAAGCAGAAGAAAATAGTAATGACCTCATATGGGCTGATCCAGGTTCATGCTGTTATGCACTGTATGCAAAGTTGAACCCCGATACAGTTCTCTTGCAGCAATCACCTTTGGCCCTTGCGAAGGCTTTAAAGGTTAACTCAGTGGAATTGGATGGGTTAAAAAAGGCACATATTCGGGACGGTGCAGCGGTCGTGCAATATCTTGTCTGGCTGGATAAGAAGATGCAGGATATATATGGAGCTTCTGGTTACTTTTTGGAGAAGGATCCTGTGAAAAAGGAGAAGCATTTGCAATCCTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGCATTTCAGAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCAGCTATAATTCATTATTCTCCAAAGGCAGAAACATGTGCTGAACTTGATCCAGACAAAATTTATCTTTTTGATTCTGGAGCCCAGTATCTAGATGGAACAACAGATATTACACGAACAGTTCATTTTGGCAAACCTTCGACTCACGAAAAAGCATGTTACACAGCAGTCTTAAAGGGTCACATTGCTCTTGGAAATGCTAGATTTCCCAATGGGACAAATGGGCATTCTCTTGATATTCTTTCCCGAATTCCTTTGTGGAATTATGGTCTTGATTATCGACATGGTACTGGTCATGGAATTGGGTCCTATCTGAATGTTCATGAAGGACCTCACTTAATCAGTTTCAAACCACAGGCTCGAAATGTACCATTGCAATCTTCCATGACTGTTACAGATGAACCTGGTTACTATGAGGATGGGGCGTTTGGGATAAGATTGGAGAATGTGCTTATTGTCAAGGAGGCTGGTACAAAATTCAATTTTGGTGATAAAGGTTACTTATCATTTGAACACATTACCTGGGCTCCATATCAGACGAAGTTGATTGACCTGAACCTTCTTAGCCCTGACGAGATAAATTGGCTGAACTCGTATCACTCGACATGCAGAGATATTCTAGCGCCACATTTGGATGAAGTTGAAAATGCATGGCTGATGAAAGCCACTGAACCTGTAGGTGCATGA 1977 0.4294 MEDTLSALRSLMASHSPPLDALVVPSEDYHQSEYVSSRDKRREFVSGFTGSAGLALVTKNEALLWTDGRYFLQAEQELSAQWKLMRIGEDPAVDIWMADNLPKEASIGVDPWCISIDTAQRWERAFAEKQQKLVQTTKNLVDEVWVNRPPAEINAAIVQPLKFAGRSVADKLKDLRKKLVHEQARGIIFTALDEVAWLYNIRGSDVAYCPVVHAFAIVTSNSAFIYVDKRKVSLEVQAHLVDNGIEIREYTAISSDATLLATDELDTVSTAKVALAETGARKIPSETNKSVNGEHQAEENSNDLIWADPGSCCYALYAKLNPDTVLLQQSPLALAKALKVNSVELDGLKKAHIRDGAAVVQYLVWLDKKMQDIYGASGYFLEKDPVKKEKHLQSLKLTEVTVSDQLEGFRASKEHFRGLSFPTISSVGSNAAIIHYSPKAETCAELDPDKIYLFDSGAQYLDGTTDITRTVHFGKPSTHEKACYTAVLKGHIALGNARFPNGTNGHSLDILSRIPLWNYGLDYRHGTGHGIGSYLNVHEGPHLISFKPQARNVPLQSSMTVTDEPGYYEDGAFGIRLENVLIVKEAGTKFNFGDKGYLSFEHITWAPYQTKLIDLNLLSPDEINWLNSYHSTCRDILAPHLDEVENAWLMKATEPVGA 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1330 658 PANTHER XAA-PRO AMINOPEPTIDASE 1 2 656 - -
Aed11g1330 658 SUPERFAMILY Creatinase/prolidase N-terminal domain 40 132 IPR029149 -
Aed11g1330 658 ProSitePatterns Aminopeptidase P and proline dipeptidase signature. 525 537 IPR001131 -
Aed11g1330 658 Gene3D - 1 145 IPR029149 -
Aed11g1330 658 CDD APP 347 593 IPR033740 GO:0070006
Aed11g1330 658 Gene3D Creatinase/methionine aminopeptidase superfamily 340 656 IPR036005 -
Aed11g1330 658 Coils Coil 119 139 - -
Aed11g1330 658 Pfam C-terminal region of peptidase_M24 597 655 IPR032416 -
Aed11g1330 658 PANTHER AMINOPEPTIDASE P1 2 656 - -
Aed11g1330 658 Gene3D - 146 335 IPR029149 -
Aed11g1330 658 Pfam Creatinase/Prolidase N-terminal domain 147 341 - -
Aed11g1330 658 Pfam Creatinase/Prolidase N-terminal domain 5 142 IPR000587 GO:0016787
Aed11g1330 658 Pfam Metallopeptidase family M24 349 585 IPR000994 -
Aed11g1330 658 SUPERFAMILY Creatinase/aminopeptidase 341 622 IPR036005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1330 Aed-Chr11 18146115 18151974 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1330 K01262 - gmx:100803268 1245.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1330 11 18146115 18151974 Aed11g1330 11 18146115 18151974 ECH