Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1316 ATGTCTTCCGCAGATAAAAACGAAGACAGCCATAGAAGGCTCAACAAGTATGCATGTTCCTCTGTGTTAGCTGCCTCTATTGTCTCTGCTATGTTTGGTTATGTGACAGGAGTGATGAGCGGAGCACTGATATTCATACAGGAAGATCTTAAAATCAGTGACCTGCAAGTGCAGCTCCTAGTAGGCATGTCACATTTGTGCGCACTACCAGGTAGCTTGGTTGCAGGAAGAATATCTGATCACATAGGCCGCCGCTACACCATCATTCTCGCTTCCATCGCCTTCTTATTGGGCTCCACTCTAATGGGCTATGGCCCATCTTATCCAATCTTAATGATCGGAAATTGCATTGTTGGAGTTGGTGTAAGTTTTGCAATGGTAGTTGCACCGGTTTACGGTACAGAGATTTCACCTCCTTCTTCCAGAGGCTTTTTCACCTCTCTTCCAACACTTTCCGTCAACACTGGATACTTGCTTGGCTATATGTCAAACTATTTCTTTGAAAAACTGTCACTGAGACTCGGGTGGAGGATGATGGTGGCTGTTCCTGCAGTTCCTTCACTCTGCCTAATCATTCTCATGTTGAAGTTGGTAGAGTCTCCAAGGTGGTTAGTCATGCAAGGGCGTGTTGGTGATGCAAGGAAAGTGCTTTTACTAGTCTCTAATGCAAAGGAAGAAGCTGAACAACGTTTGAAGGAAATAAAAGGTGTTGTTGGAATCGATGAAAATTGCACCCAAGACACTGTCGAGGTTCCAAAGAAAACAAGTAGCGGTGAAGGAGCTTTGAAGGAGTTGTTTTGCAAAGCTTCACCACCTGTGCGTAGGATACTGATTGCAGCCATTGGACTTCATTTGTTCCTGCGGATTGGTGGAAGTGCGGTTATTTTGTTATATAGTCCAAGGGTGTTTGAGAGAACAGGAATCACCAACAAGAGCACGCTCATGCTAGCGACTGTTGGCATGGGAATAAGCAAAGTTGTGTTTTCATTCGTATCAATATTCTTGTCGGATAGATTCGGGAGGAGGATTCTGTTGCTGGTTAGTGCAGTTGGTGTGACTGTGACCATATTGGGGTTGGGTATTTGCTTGACCATAGTGGAGCAGTACTCCAAAGAAAGACTAGTTTGGGCATCAAGCTTGACCATTATCCTAACCTACATCTTTGTGGCTTCTATGTCTATCGGAATAGGACCTGTGACATGGGTTTATAGCTCTGAGATACTTCCTCTTAGGTTCAGAGCTCAAGGCCTTGGTGTCTGTGTGATTGTCAACAGAATTACGACAGTGGCAGTGGTTACAAGTTTCATTTCGATTTATAAAGCGATGACAATGGGTGGGATTTTCTTCTTGTTTACCGGTATCAATGCTGTGGCTTTGCTGTTCTATTCCTTTTTGCCTGAAACTAAAGGAATATCATTAGAAGATATGGAGACCATCTTTCAAAGAAATTCTAAGTAA 1458 0.4362 MSSADKNEDSHRRLNKYACSSVLAASIVSAMFGYVTGVMSGALIFIQEDLKISDLQVQLLVGMSHLCALPGSLVAGRISDHIGRRYTIILASIAFLLGSTLMGYGPSYPILMIGNCIVGVGVSFAMVVAPVYGTEISPPSSRGFFTSLPTLSVNTGYLLGYMSNYFFEKLSLRLGWRMMVAVPAVPSLCLIILMLKLVESPRWLVMQGRVGDARKVLLLVSNAKEEAEQRLKEIKGVVGIDENCTQDTVEVPKKTSSGEGALKELFCKASPPVRRILIAAIGLHLFLRIGGSAVILLYSPRVFERTGITNKSTLMLATVGMGISKVVFSFVSIFLSDRFGRRILLLVSAVGVTVTILGLGICLTIVEQYSKERLVWASSLTIILTYIFVASMSIGIGPVTWVYSSEILPLRFRAQGLGVCVIVNRITTVAVVTSFISIYKAMTMGGIFFLFTGINAVALLFYSFLPETKGISLEDMETIFQRNSK 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1316 485 PANTHER POLYOL/MONOSACCHARIDE TRANSPORTER 1 10 485 - -
Aed11g1316 485 Gene3D MFS general substrate transporter like domains 10 485 IPR036259 -
Aed11g1316 485 SUPERFAMILY MFS general substrate transporter 8 477 IPR036259 -
Aed11g1316 485 TIGRFAM SP: MFS transporter, sugar porter (SP) family 16 475 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed11g1316 485 Pfam Sugar (and other) transporter 23 480 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aed11g1316 485 ProSitePatterns Sugar transport proteins signature 1. 75 92 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aed11g1316 485 PRINTS Sugar transporter signature 112 131 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed11g1316 485 PRINTS Sugar transporter signature 405 417 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed11g1316 485 PRINTS Sugar transporter signature 382 403 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed11g1316 485 PRINTS Sugar transporter signature 29 39 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed11g1316 485 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 470 IPR020846 GO:0022857
Aed11g1316 485 ProSitePatterns Sugar transport proteins signature 1. 332 349 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aed11g1316 485 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 10 485 IPR045262 GO:0015144
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1316 Aed-Chr11 18047480 18049027 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1316 14 485 Organic Solute Cotransporters AT4G36670 52.008 9.15e-178 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1316 - - gmx:100813954 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1316 11 18047480 18049027 Aed11g1316 11 18047480 18049027 ECH