Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1310 ATGAAGTGCCCGTACTGTTCGGCGGCGCAGGGGCGTTGCGCCACGACGAGCAGCGGGCGTTCGATAACGGAGTGCACGTCTTGCGGGCGCGTGGTGGAGGAGCGACAGTCGCATCCCCACCACGTGTTCCACGTACGCGCCCAGGACAACCCTCTGTGTCTGGTCACATCGGATCTCTCTCTCCCCGCGCTCAACCAAAACAACGACGAGGAGGACCCTTTCGAGTCCACGGGCTTCATCACCGCGTTCTCGACCTGGGCCCTCGAGCCCAGCCCACTCTACCTCCAGTCCTCCCTCTCCTTCTCCGGCTACCTCGCCGAGCTCGAACGCACTCTCGAATCTTCCTCCTCCTCTTCCTCTTCCTCTTCTACTCCTTCGTCGACGGTGGTGGTTGATAACCTAAGGGCGTACATGCAGATTATCGATGTGGCGTCAATTCTAGGGTTGGACTGCGATATCTCCGACCACGCTTTTCAGTTATTCAGGGATTGTTGCTCGGCTACGTGTCTCAGAAACCGCAGTGTGGAGGCGCTTGCCACTGCCGCACTCGTTCAGGCCATTAGAGAGGCTCAAGAGCCCAGAACTCTTCAGGAAATTTCAATTGCAGCCAATGTGCCGCAAAAGGAAATTGGGAAATACATCAAGATACTGGGAGAAGCTTTGCAGCTAAGTCAACCTATTAACAGCAATTCCATTTCAGTTCATATGCCAAGATTTTGCACGCTTCTTCAGCTCAATAAATCTGCCCAGGAACTGGCTACTCACATAGGAGAGGTTGTGATCAACAAATGCTTCTGCACTCGCAGGAATCCGATTAGCATCTCAGCTGCTGCTATATATTTGGCTTGCCAACTTGAAGACAAACGCAAAACCCAGGCAGAAATTTGTAAGGTAACTGGTCTTACTGAGGTCACTCTCCGTAAAGTGTACAAGGAACTGTTGGAGAATTGGGATGATTTGCTCCCCTCTAATTACACCCCAGCTGTTCCTCCAGAGAGGGCATTTCCCACAACGATAATTGCTTCCGGTCGTTCTTCAACAGCTAAGGTTGATGCTGTGGAGGTTATTTCTTCTTTGGACTCAGAAAAGTTGCCAGATATTAAACCTAGCAAACCTAATGAGGTCTCAGGTATGGTTCATCAGTCCAGGGGGAAGGATGAGGCTGCTGAAGGTAAAAGCAATGCTCATGGAAACCACTCCACACCAAATCAACAGCCAACTTTTTGGCAATCCCAGATTCCCAGTGGGACACACAATCATCAGAATGTTCTACAAGGAATGGATATCGATGTACTGCAGCGAAACCACCAACAACTGCCTGAACACATGGCAGAGGATACAAATGGTGCTGCCAATGGTAGTTCTCTAAAATCAAGCCAACTTTGCAGTCCTCCTGCTTCTAGTGCAAGTTCTGTTATGAGGCAGTTTTCAGCTCCTCCCCCTTCATCTGGGCCTTCAAATGTTCGAGTAGTACAGTCACCTAAGATAATGCCAGGTTATCCGGAGCACTGA 1512 0.5053 MKCPYCSAAQGRCATTSSGRSITECTSCGRVVEERQSHPHHVFHVRAQDNPLCLVTSDLSLPALNQNNDEEDPFESTGFITAFSTWALEPSPLYLQSSLSFSGYLAELERTLESSSSSSSSSSTPSSTVVVDNLRAYMQIIDVASILGLDCDISDHAFQLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTIIASGRSSTAKVDAVEVISSLDSEKLPDIKPSKPNEVSGMVHQSRGKDEAAEGKSNAHGNHSTPNQQPTFWQSQIPSGTHNHQNVLQGMDIDVLQRNHQQLPEHMAEDTNGAANGSSLKSSQLCSPPASSASSVMRQFSAPPPSSGPSNVRVVQSPKIMPGYPEH 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1310 503 MobiDBLite consensus disorder prediction 448 490 - -
Aed11g1310 503 Pfam Transcription factor TFIIB repeat 136 217 IPR013150 GO:0017025
Aed11g1310 503 Pfam Transcription factor TFIIB repeat 234 315 IPR013150 GO:0017025
Aed11g1310 503 SMART cyclin_7 234 315 IPR013763 -
Aed11g1310 503 SMART cyclin_7 138 219 IPR013763 -
Aed11g1310 503 SUPERFAMILY Cyclin-like 232 330 IPR036915 -
Aed11g1310 503 MobiDBLite consensus disorder prediction 445 503 - -
Aed11g1310 503 CDD CYCLIN 136 217 IPR013763 -
Aed11g1310 503 PRINTS Transcription initiation factor IIB signature 269 285 IPR000812 GO:0006352|GO:0070897
Aed11g1310 503 PRINTS Transcription initiation factor IIB signature 235 253 IPR000812 GO:0006352|GO:0070897
Aed11g1310 503 PRINTS Transcription initiation factor IIB signature 180 199 IPR000812 GO:0006352|GO:0070897
Aed11g1310 503 PRINTS Transcription initiation factor IIB signature 206 221 IPR000812 GO:0006352|GO:0070897
Aed11g1310 503 PRINTS Transcription initiation factor IIB signature 18 38 IPR000812 GO:0006352|GO:0070897
Aed11g1310 503 PRINTS Transcription initiation factor IIB signature 301 315 IPR000812 GO:0006352|GO:0070897
Aed11g1310 503 Gene3D - 134 225 - -
Aed11g1310 503 Gene3D - 234 330 - -
Aed11g1310 503 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 501 IPR000812 GO:0006352|GO:0070897
Aed11g1310 503 SUPERFAMILY Cyclin-like 135 225 IPR036915 -
Aed11g1310 503 MobiDBLite consensus disorder prediction 394 421 - -
Aed11g1310 503 MobiDBLite consensus disorder prediction 363 421 - -
Aed11g1310 503 PANTHER PLANT-SPECIFIC TFIIB-RELATED PROTEIN 1 1 501 - -
Aed11g1310 503 CDD CYCLIN 236 314 IPR013763 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1310 K03124 - gmx:102662353 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1310 11 18018982 18025133 Aed11g1310 11 18018982 18025133 ECH