Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1301 ATGTGGCGCTGCATCGCTCGTGGACTTCGTGGACCTGCTTCCACCAGATCCACCTCCGATCACTCACTTGGATCTCACTTTTCTAGATTCTTCTCTAGTGGGGCGAACTCCTCGTACACCGTGGTGGATCATACTTATGATGCTGTTGTTGTAGGTGCTGGTGGCGCGGGACTGAGAGCTGCTATTGGACTTTCAGAACATGGGTTCAATACTGCTTGTATTACCAAGCTCTTCCCAACTCGTTCACACACTGTTGCAGCTCAGGGTGGTATAAATGCTGCTTTGGGAAATATGACTGAAGATGACTGGAGGTGGCACATGTATGACACTGTCAAGGGAAGTGATTGGCTAGGAGACCAGGATGCCATCCAATATATGTGTAGGGAAGCACCAAAAGCGGTCATTGAGCTAGAGAATTATGGATTACCATTTTCCCGAACAGAGGAAGGAAAAATATATCAGCGTGCATTTGGTGGTCAAAGCTTAAATTATGGAAAAGGTGGTCAAGCTTACCGCTGTGCATGTGCTGCTGATCGAACTGGGCATGCTTTATTGCACACTCTCTATGGCCAAGCTATGAGACATAATACCCAGTTTTTTGTGGAATATTTTGCATTGGATCTTATAATGAATAGTGATGGCACTTGCCAAGGAGTGATTGCCTTGAATATGGAGGATGGAACACTACATCGTTTCCAAGCTGGTTCAACAATTTTGGCCACAGGGGGTTATGGTAGAGCATACTTCTCTGCAACCTCAGCACATACTTGTACTGGAGATGGCAATGCCATGGTTGCACGTGCTGGGATCCCTCTTGAGGATTTGGAGTTTGTACAATTTCACCCAACAGGTATATATGGAGCAGGTTGCCTTATCACAGAAGGATCTCGTGGTGAAGGTGGAATTCTTAGGAATAGCGAGGGTGAGCGATTTATGGAACGGTATGCCCCTACTGCAAAGGATCTTGCATCAAGAGATGTAGTTTCAAGAGCAATGACGATGGAGATTCGGGAAGGTCGTGGTGTAGGATCCCTGAAAGATCACATTTATCTCCACTTGAATCACTTACCCCCAGATGTGCTCAAAGAGAGACTTCCTGGCATCTCTGAAACTGCTGCTATTTTTGCTGGTGTGGATGTTACAAAGGAACCCATTCCTGTTTTGCCAACCGTACATTATAACATGGGTGGTATTCCAACAAACCATTATGGAGAGGTGGTTACCATTAAAGGTGACAATCCAGATACAGTGATTCCTGGATTAATGGCTGCCGGGGAAACGGCCTGTGCATCAGTCCATGGCGCCAATAGGCTTGGTGCAAATTCACTTCTGGATATTGTTGTATTTGGTAGAGCTTGA 1359 0.4599 MWRCIARGLRGPASTRSTSDHSLGSHFSRFFSSGANSSYTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEEGKIYQRAFGGQSLNYGKGGQAYRCACAADRTGHALLHTLYGQAMRHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFQAGSTILATGGYGRAYFSATSAHTCTGDGNAMVARAGIPLEDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGSLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHYGEVVTIKGDNPDTVIPGLMAAGETACASVHGANRLGANSLLDIVVFGRA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1301 452 PANTHER SUCCINATE DEHYDROGENASE [UBIQUINONE] FLAVOPROTEIN SUBUNIT, MITOCHONDRIAL 3 452 - -
Aed11g1301 452 SUPERFAMILY Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 275 393 IPR027477 -
Aed11g1301 452 Pfam FAD binding domain 47 443 IPR003953 -
Aed11g1301 452 SUPERFAMILY FAD/NAD(P)-binding domain 38 451 IPR036188 -
Aed11g1301 452 PANTHER SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT 3 452 IPR030664 -
Aed11g1301 452 Gene3D - 47 451 IPR036188 -
Aed11g1301 452 TIGRFAM sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 47 451 IPR014006 GO:0016627|GO:0022900|GO:0050660
Aed11g1301 452 TIGRFAM sdhA_forward: succinate dehydrogenase, flavoprotein subunit 44 452 IPR011281 GO:0006099|GO:0016627|GO:0050660
Aed11g1301 452 ProSitePatterns Fumarate reductase / succinate dehydrogenase FAD-binding site. 81 90 IPR003952 GO:0016491
Aed11g1301 452 Gene3D Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 285 388 IPR027477 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1301 K00234 - gmx:100818379 895.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1301 11 17955780 17962204 Aed11g1301 11 17955780 17962204 ECH