Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1283 ATGGGATTCTTACAAGCATATGGATCATATTATAGGCATGGAATTAAACAATATCGCAATGGTTGGGCGGATGGACCAGCTTATATCACACAGTGTCCAATACAGACAGGAGGCAGCTATACTTATGATTTCAATGTTACTGATCAGAGAGGAACACTATGGTGGCATGCACACATTTTCTGGTTGAGGGCCACTGTGTATGGTGCAATAGTGATTATGCCTAAACCTGGAACACCATTTCCTTTCCCACAGCCAGCCAGAGAATTTGAACTTATCCTAGGAGAATGGTGGCACAAAGACGTGGAAGAGATTGAAACGCAAGGGAACCAAATGGGGTTGCCACCAAATATGTCAGATGCACATACAATCAATGGGAAGCCAGGACCACTCTTTCCTTGCTCAGAGAAACATACATTTGCAATTGAGGTTGAACAAGGGAAGACTTACCTACTGAGAATCATCAATGCTGCCCTCGATGACGAGCTTTTCTTTGCAATTGCGGGTCACAATTTGACAGTAGTGGAGGTTGATGCAGTTTACACAAAACCATTCACAACACAAGCCATTATAATTGCACCTGGTCAAACCACAAATGTTATAGTGAAGGCCAACCAAGTAGCAGGAAGATACTTCATGGCTACAAGGACCTTTATGGATGCACCAATCCCAGTTGACAACAAAGCCGCTACAGCTATATTCCAATACAAAGGCATTCCAAACACTGTCCTTCCTTCTCTTCCTTCTCTTCCCGCTTCCAATGACACACGTTTTGCTTTGAGTTACAACGACAAATTAAGAAGCCTAAACACTCCTCAGTACCCTGCTAATGTACCACTCAAAGTTGATCGAAACCTCTTTTACACCATCGGTTTGGCAAAGAATTCTTGCCCCACGTGCCTCAATGGGACCCGGTTTCTCGCTTCCTTAAACAATGTCTCTTTTGTGATGCCTCAAACCGCGCTTCTCCAAGCTCACTACTTCAATATCAAGGGGGTTTACAGAACTGATTTTCCCGATAAGCCTTTAACTTCTTTTAATTACACGGGTGCACCATTAACGGCTAATCTTGGCACTTTAACCGGCACAAGAATTAGCAAGGTTCCGTTTAATTCTACAGTGGAGCTAGTTTTGCAAGACACCAACCTCCTCACTGTTGAGTCGCACCCTTTCCATCTTCATGGCTATAACTTCTTTGTTGTTGGAACTGGGATTGGTAATTTTGATCCTAAAAAAGACCCTGCTAAATACAACCTCGTGGATCCTATTGAGAGGAACACTGTTGGGGTTCCCACCGGTGGTTGGACTGCAATTCGTTTCAGGGCTGATAATCCGGGTGTTTGGTTCATGCACTGTCATTTGGAGCTGCACACAGGTTGGGGATTGAAAACGGCGTTTCTTGTGGAAGATGGACCAGGACAAGATCAATCTGTTGTGCCTCCACCAAAGGACCTTCCAGCATGCTAG 1464 0.444 MGFLQAYGSYYRHGIKQYRNGWADGPAYITQCPIQTGGSYTYDFNVTDQRGTLWWHAHIFWLRATVYGAIVIMPKPGTPFPFPQPAREFELILGEWWHKDVEEIETQGNQMGLPPNMSDAHTINGKPGPLFPCSEKHTFAIEVEQGKTYLLRIINAALDDELFFAIAGHNLTVVEVDAVYTKPFTTQAIIIAPGQTTNVIVKANQVAGRYFMATRTFMDAPIPVDNKAATAIFQYKGIPNTVLPSLPSLPASNDTRFALSYNDKLRSLNTPQYPANVPLKVDRNLFYTIGLAKNSCPTCLNGTRFLASLNNVSFVMPQTALLQAHYFNIKGVYRTDFPDKPLTSFNYTGAPLTANLGTLTGTRISKVPFNSTVELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPKKDPAKYNLVDPIERNTVGVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFLVEDGPGQDQSVVPPPKDLPAC 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1283 487 PANTHER MULTI-COPPER OXIDASE 9 487 IPR045087 -
Aed11g1283 487 PANTHER LACCASE 9 487 - -
Aed11g1283 487 SUPERFAMILY Cupredoxins 82 261 IPR008972 -
Aed11g1283 487 SUPERFAMILY Cupredoxins 278 487 IPR008972 -
Aed11g1283 487 Pfam Multicopper oxidase 354 469 IPR011706 GO:0005507|GO:0016491
Aed11g1283 487 Gene3D - 86 270 IPR008972 -
Aed11g1283 487 Gene3D - 293 487 IPR008972 -
Aed11g1283 487 CDD CuRO_3_LCC_plant 332 470 IPR034289 GO:0005507
Aed11g1283 487 Pfam Multicopper oxidase 13 75 IPR011707 GO:0005507
Aed11g1283 487 Gene3D - 9 81 IPR008972 -
Aed11g1283 487 Pfam Multicopper oxidase 91 237 IPR001117 -
Aed11g1283 487 TIGRFAM laccase: laccase 11 487 IPR017761 GO:0046274|GO:0048046|GO:0052716
Aed11g1283 487 ProSitePatterns Multicopper oxidases signature 2. 450 461 IPR002355 GO:0005507
Aed11g1283 487 ProSitePatterns Multicopper oxidases signature 1. 445 465 IPR033138 -
Aed11g1283 487 SUPERFAMILY Cupredoxins 13 104 IPR008972 -
Aed11g1283 487 CDD CuRO_2_LCC_plant 91 235 IPR034285 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1283 Aed-Chr11 17861499 17864363 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1283 K05909 - gmx:100820452 959.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1283 11 17861499 17864363 Aed11g1283 11 17861499 17864363 ECH