Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1270 ATGGCTCACCTTGGAGATTCAAGTGCATGGAGTTCGAATAAACCTCACCCTAAGCTCAATGAAAGAATTCTGTCTTCTCTGTCGCGGAGAACTGTTGCTGCTCACCCCTGGCACGACTTAGAAATTGGACCAGGAGCTCCAGCAGTTTTCAACTGTGTGGTTGAAATTGGAAAAGGCAGTAAGGTTAAGTATGAGCTGGACAAGACAAGTGGACTTATAAAGGTGGATCGTATTCTTTATTCATCAGTTGTCTACCCACACAACTATGGTTTTATCCCAAGAACCATTTGTGAAGACAGTGATCCTATGGACGTGCTGGTTCTTATGCAGGAACCTGTGCTTCCTGGATCCTTCCTTCGTGCTCGTGCTATTGGACTAATGCCTATGATTGACCAGGGTGAGAGGGATGACAAGATCATAGCAGTTTGTGCTGATGACCCTGAGTTCCGTCATTACACAGACATCAAGGAGCTTCCTCCACATCGTCTTGCTGAAATTAGAAGATTCTTTGAAGACTACAAGAAGAATGAAAACAAAATAGTTGATGTTGAAGACTTTCTACCAGCTGAATCTGCCATTGAGGCCATCAAATACTCCATGGACTTGTATGCTGCTTACATAGTTGAGAGCTTAAGGCACTAA 642 0.4377 MAHLGDSSAWSSNKPHPKLNERILSSLSRRTVAAHPWHDLEIGPGAPAVFNCVVEIGKGSKVKYELDKTSGLIKVDRILYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRARAIGLMPMIDQGERDDKIIAVCADDPEFRHYTDIKELPPHRLAEIRRFFEDYKKNENKIVDVEDFLPAESAIEAIKYSMDLYAAYIVESLRH 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1270 213 Hamap Inorganic pyrophosphatase [ppa]. 48 204 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Aed11g1270 213 SUPERFAMILY Inorganic pyrophosphatase 30 208 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Aed11g1270 213 Pfam Inorganic pyrophosphatase 52 203 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Aed11g1270 213 PANTHER BNAC07G03580D PROTEIN 15 207 - -
Aed11g1270 213 CDD pyrophosphatase 49 201 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Aed11g1270 213 Gene3D Inorganic pyrophosphatase 31 209 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Aed11g1270 213 PANTHER INORGANIC PYROPHOSPHATASE 15 207 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Aed11g1270 213 ProSitePatterns Inorganic pyrophosphatase signature. 99 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1270 Aed-Chr11 17809019 17812288 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1270 K01507 - gmx:100306258 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1270 11 17809019 17812288 Aed11g1270 11 17809019 17812288 ECH