Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1269 ATGGGAACCTTAGGCAGAGCTTTCTACGCCGTCGGATTTATGATCCGCGAGACCGGCCAAGCCATGGATCGGCTTGGGTCTCGTCTCCAAGGCAACTACCTCTTTCGAGAACAGCTGTCTAGGCATCGACCTCTCATGAATCTGTTCGACAAAGCTCCCTCGGTTCACAAGGATGCATTTGTGGCCCCCAGTGCCTCCCTCCTCGGCGATGTTCACGTTGGCCCAGCTTCCTCCATTTGGTATGGATGCGTTCTCAGAGGTGATGCTAACAGCATTGTTATTGGATCTGGAACTAATATACAAGATAATTCTCTTGTCCATGTTGCCAAGTCTAATTTGAGTGGAAAAGTCTTACAAACTATCATTGGAGATAATGTGACTGTAGGTCATAGTGCTGTCTTACAAGGATGTACTGTTGAGGACGAGGCATTTATTGGCATGGGTGCAACCTTGCTTGATGGTGTATATGTTGAGAAACATGCCATGGTTGCTGCTGGAGCTCTTGTTAGGCAGAATACAAGGATCCCTTATGGAGAGGTTTGGGGAGGTAATCCAGCAAGGTTCTTGAGGAAGCTTACAGAAGATGAAATGACCTTCTTCTCACAATCTGCCTTAAATTATTCCAATTTGGCTCAGGCTCATGCTGCTGAAAATGCAAAAGAACTTGAGGAGACTGAATTTGTAAAAGTTCTTCACAAGAAATTTGCTCGTCATGGTGAGGAATATCATTCAGTGCTAGGTGGTGTTCAGGAAACTCCTGCAGAGCTTAACGTGGCGGATAATGTTTTACTAGACAAATCTCCCAAGGCTTAA 813 0.4563 MGTLGRAFYAVGFMIRETGQAMDRLGSRLQGNYLFREQLSRHRPLMNLFDKAPSVHKDAFVAPSASLLGDVHVGPASSIWYGCVLRGDANSIVIGSGTNIQDNSLVHVAKSNLSGKVLQTIIGDNVTVGHSAVLQGCTVEDEAFIGMGATLLDGVYVEKHAMVAAGALVRQNTRIPYGEVWGGNPARFLRKLTEDEMTFFSQSALNYSNLAQAHAAENAKELEETEFVKVLHKKFARHGEEYHSVLGGVQETPAELNVADNVLLDKSPKA 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1269 270 PANTHER YRDA, PUTATIVE-RELATED 1 270 - -
Aed11g1269 270 Pfam Hexapeptide repeat of succinyl-transferase 119 151 IPR001451 -
Aed11g1269 270 Gene3D Hexapeptide repeat proteins 44 223 - -
Aed11g1269 270 PANTHER DYNACTIN SUBUNIT P25 1 270 - -
Aed11g1269 270 CDD LbH_gamma_CA_like 54 212 - -
Aed11g1269 270 SUPERFAMILY Trimeric LpxA-like enzymes 45 212 IPR011004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1269 Aed-Chr11 17805833 17808368 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1269 K01726 - gmx:100794184 511.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1269 11 17805833 17808368 Aed11g1269 11 17805833 17808368 ECH