Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1239 ATGGCGGCGACGTCGTATCTGACGGCAACGCAGAGGTACGCGGCGGCAGCGTTGTTTGGGCTGGCTCTGCACCAGGCCCAACTTCACCAGACCAACCCTTTGGGCCTATCCCTATCGACCGGCGATGACTTCCCTTCCGATTCTGAAACTAGTTTCGTAGTTTCCGAAGATCCAAACCTTTGGGTCTATCACCGTTCCGGTTTGCTCCGCCCTGTGTTCAATTATCTAGATATTGATTCCGCAGCATGGTCTGGACTCGAGGAAACTGCTGGCTCTTCTTCAGCTTCAAGTCACGTCGGACCGTTCTTGAGATTATTATCAGAAGATTTTGATGATGATGATGATGATGATTCTTCGCAAAGGTCGGATCAAGAACTTGCTTTGTCACAATCTGTTGATGCTATGGTACATAGCCTGGAAAACAACTCCCAGTCTCTCATGTCTAGAAAGGAGAAGTTACGTGAATACGAGCTTCAATGTCGTGAAAAGTTTTCAACTGCTGATCATCAGCCAAATTCCAAGAAGGTAGATTTGCAATTTGAAACCCAAGAGGACCCAGGTACTCCTTTCCTTGACTGTGAAAGCTCAAACCAGGGATCTTTTGAAAGTAATATTGGAGAGGTAATGATTCTCAGCTATCCCAGGAAAGTAACAGTGCTCTACCAGCTTCTCTCTGCTTGTCTATCAGATTTAGGTGAAAATAACAAGAAATATTGCCGGAGGAGAAAGGGCTATGATGCCCGACATCGTGTCACTCTACGCCTGCTGGCAACTTGGCTCGATATCAACTGGGCAAAAATGGAGGCCATTGAGACAATAATTACTAGTTCTGCAATGGCTTTCATCAAAGAGAAAGAGGCAAGCGAAGAAGACTCTCAGTCAAAAGAAAATAAGTGGGCTAAATGGAAGAGGGGTGGTATCATTGGTGCTGCTGCCTTAACTGGGGGAACTTTGATGGCTATTACTGGTGGATTAGCTGCCCCAGCAATTGCTGCAGGGCTTGCTGCTGGAGCTGGATTCTCTGGAAGCAAAATGGCTAGAAGAGTTGGGGATGTTGAAGAGTTTGAATTCAAATCTGTAGGAGAAAACCTTAACCAAGGTAGGCTTGGGGTTGAGATCATGATCTCTGGATTTGTCTTTGAGGATGACGATTTTATAAGGCCGTGGGAAGGATTGAATGACAACTTGGAGAGGAATTACAACAGAGCTGATGAAGCAAGGGGCAATGTTGACGGTCTTGCATGCTCTTGTAACTGCATTGGCTTGGCCAACTGCATTACTTGCAGCAACCGAATACATAGACAGCATATGGACAATTGCTATCGACAGAGGCTTGGCAAAGTAATGATAACAGACAAGGCAGGAAAGTTGCTTGCTGAAGTATTATTGGGAGGATTGCAGGGAAATAGGCCTGTTACACTTGTAGGTTACTCCCTTGGGGCTAGAGTTATTTTCAAATGTCTGGAGTGTTTGGCTGAAACAGAAAACAGTGCTGAACTGGTAGAGAGAGTTGTTCTTCTTGGAGCACCCATTGCAATCAAGGGTGAGAATTGGGAAGCTGCTAGAAAGATGGTAGCAGGGAGATTTGTAAATGCTTATTCAAGAACTGACTGGATGCTTGGAGTTGCTTGGCGCTCCAGTCTACTTTCTCAAGGATTAGCTGGAATCCAACCTGTCGATGTTCCTGGGATCCAAAATGTTGACGTGACGGATCACATAGAGGGTCATTCTTCATATTTGTGGGCTACACAAAAGGTCATAGAGGAACTTGAATTAGATACGTATTATACCGTTTATAACAACATCCTTTCCAAACAGTGA 1821 0.4519 MAATSYLTATQRYAAAALFGLALHQAQLHQTNPLGLSLSTGDDFPSDSETSFVVSEDPNLWVYHRSGLLRPVFNYLDIDSAAWSGLEETAGSSSASSHVGPFLRLLSEDFDDDDDDDSSQRSDQELALSQSVDAMVHSLENNSQSLMSRKEKLREYELQCREKFSTADHQPNSKKVDLQFETQEDPGTPFLDCESSNQGSFESNIGEVMILSYPRKVTVLYQLLSACLSDLGENNKKYCRRRKGYDARHRVTLRLLATWLDINWAKMEAIETIITSSAMAFIKEKEASEEDSQSKENKWAKWKRGGIIGAAALTGGTLMAITGGLAAPAIAAGLAAGAGFSGSKMARRVGDVEEFEFKSVGENLNQGRLGVEIMISGFVFEDDDFIRPWEGLNDNLERNYNRADEARGNVDGLACSCNCIGLANCITCSNRIHRQHMDNCYRQRLGKVMITDKAGKLLAEVLLGGLQGNRPVTLVGYSLGARVIFKCLECLAETENSAELVERVVLLGAPIAIKGENWEAARKMVAGRFVNAYSRTDWMLGVAWRSSLLSQGLAGIQPVDVPGIQNVDVTDHIEGHSSYLWATQKVIEELELDTYYTVYNNILSKQ 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1239 606 PANTHER TRANSMEMBRANE/COILED-COIL PROTEIN (DUF726) 335 399 - -
Aed11g1239 606 PANTHER TRANSMEMBRANE/COILED-COIL PROTEIN (DUF726) 3 336 - -
Aed11g1239 606 Gene3D alpha/beta hydrolase 426 592 IPR029058 -
Aed11g1239 606 PANTHER TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4 3 336 IPR007941 -
Aed11g1239 606 SUPERFAMILY alpha/beta-Hydrolases 466 550 IPR029058 -
Aed11g1239 606 PANTHER TRANSMEMBRANE/COILED-COIL PROTEIN (DUF726) 451 601 - -
Aed11g1239 606 Pfam Protein of unknown function (DUF726) 336 400 IPR007941 -
Aed11g1239 606 Pfam Protein of unknown function (DUF726) 436 592 IPR007941 -
Aed11g1239 606 PANTHER TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4 335 399 IPR007941 -
Aed11g1239 606 PANTHER TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4 451 601 IPR007941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1239 Aed-Chr11 17564201 17569483 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1239 - - gmx:100782894 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1239 11 17564201 17569483 Aed11g1239 11 17564201 17569483 ECH