Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1235 ATGTTGCAGAGACCTAGACGCCGTTGCGAGGGCACAGCCATGGGCGCCATCGTTCTGGATCTCCGACCCGGTCTCGGAATCGGACCCTTCTCCCTCGGGATGCCTATATGTGAAGCATTTGCTCAGATAGAGCAGCAACCTAATATATACGATGTGGTGCATGTCAAGTATTTTGACGAGGAGCCCCTGAAGTTGGATACTGTTATTAGCTTTCCTGATCATGGCTTCCATCTTCGTTTTGATCCCTGGTCACAGAGACTGCGCCTTATTGAAATATTTGATGTAAAGCGACTTCAGATGCGCTATTCTACTTCCTTGATTGGGGGACCATCAACTTTAGCTACTTTTGTTGCTGTATATGCACTGTTTGGGCCCACATATCCTGGAATTTTTGACAAGGATAGAGGCATTTACACCCTATTCTATCCGGGGCTTTCCTTTGCATTTCCTATTCCAAGTCAATTTACAGACTGCTGTCATGATGGAGGAGTGGAATTGCCATTGGAGTTTCCTGATGGGACCACGCCAGTTACATGCCGTGTTTCTATATATGATAGCTCCTCTGGTAAGAAGGTTGGTGTGGGGGCCTTAATGGATAAGGCTTCTGCTCCTCCATTACCTGCTGGCAGCATTTACATGGAAGAGGTCCATGTGAAGCTGGGGGAAGAATTATACTTCACTGTTGGCTCTCAACACATTCCTTTTGGTGCATCTCCACAGGATGTGTGGACTGAGCTTGGACGTCCCTGTGGCATTCATCAAAAGCAGGTAGATCAAATGGTTATTCATTCTGCTTCAGATCTTCGGCCACGGACAACTCTCTGTGGAGATTACTTCTATAATTATTTTACTCGTGGTCTGGACATCTTATTTGATGGACAGGTTTCAGCAGGGGGATCTTTCCAGGAAGTAAATAATAGCAAACAAAGGGTTATTACACCGAGCACCAAATGGGAACAAGTTAAGGAAATACTTGGGGATTGTGGGCGAGCTGCAATCCAAACACAAGGCTCAGCAAGTAACCCCTTTGGGTCTACTCTTGTTTATGGTTATCAAAATATTGCATTTGAGGTGATGAAGAATGGTTATATTGCAACAATAACTCTATTCCAATCATGA 1119 0.4504 MLQRPRRRCEGTAMGAIVLDLRPGLGIGPFSLGMPICEAFAQIEQQPNIYDVVHVKYFDEEPLKLDTVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYSTSLIGGPSTLATFVAVYALFGPTYPGIFDKDRGIYTLFYPGLSFAFPIPSQFTDCCHDGGVELPLEFPDGTTPVTCRVSIYDSSSGKKVGVGALMDKASAPPLPAGSIYMEEVHVKLGEELYFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDLRPRTTLCGDYFYNYFTRGLDILFDGQVSAGGSFQEVNNSKQRVITPSTKWEQVKEILGDCGRAAIQTQGSASNPFGSTLVYGYQNIAFEVMKNGYIATITLFQS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1235 372 PANTHER UPF0183 PROTEIN C16ORF70 12 295 IPR005373 -
Aed11g1235 372 PANTHER UPF0183 PROTEIN C16ORF70 298 371 IPR005373 -
Aed11g1235 372 Pfam Phagosome assembly factor 1 302 370 IPR005373 -
Aed11g1235 372 Pfam Phagosome assembly factor 1 27 294 IPR005373 -
Aed11g1235 372 PANTHER UPF0183 PROTEIN 298 371 IPR039156 -
Aed11g1235 372 PANTHER UPF0183 PROTEIN 12 295 IPR039156 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1235 - - gmx:100781434 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1235 11 17534975 17540498 Aed11g1235 11 17534975 17540498 ECH