Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1227 ATGGAGAACACCGAGGGATCCGGATCTGCGACGAACGGAGCGGTGGATCATGCTCCGGCGCGCAAGGTGGCATTGATAACCGGAATTACCGGTCAAGACGGTTCGTACCTGACGGAATTCCTTCTGAACAAGGGGTACGAGGTGCACGGTCTGATCCGTCGCTCATCGAACTTCAACACCCAACGCATCGACCACATCTACGTTGATCCCCACAACGCCCACAAGGCCCGCATGAAGCTCCACTATGCCGATCTCTCCGACGCCTCCTCCCTCCGCCGCTGGCTCGACACCCTCCTCCCCGACGAGATCCCCGACTACACCGCCGACGTGGTCGCCACCGGCGCCCTCCGCCTCCTCGAGGCCGTCCGCTCCCACATCGCCGCCTCAGGCCGCTCGAACATCCGCTACTACCAAGCAGGCTCCTCCGAGATGTTCGGGTCCACCGCTCCCCCCCAGTCGGAGACCACCCCCTTCCACCCCCGGTCCCCCTACGCCGTATCGAAATGCGCTGCCCACTGGTACACCGTGAACTACCGCGAGGCCTACGGACTCTTCGCCTGCAACGGCATCCTCTTCAACCACGAGTCCCCGCGGCGCGGCGAGAATTTCGTGACACGCAAGATCACGCGTGCGGTGGGGCGGATCAAGATTGGGCTCCAGAGCAAGCTCTTCTTGGGAAACCTCCAGGCCTCCCGAGATTGGGGTTTCGCTGGTGACTACGTGGAAGCCATGTGGCTGATGCTGCAGCAGGAGAAGCCCGACGACTATGTTGTCGCCACTGAGGAGTCCCACACCGTTGAGGAGTTCTTGGAAGTCGCGTTCGGCAATGTGGGTCTCAATTGGAGGGATCACGTCGTCATTGACAAGAGGTACTTTCGCCCCTCTGAGGTGGATAACCTCAAAGGGGACGCTTCCAAGGCCAAGAAAGTGCTTGGTTGGAAACCCAAGGTTGGGTTTGAGCAGCTTGTTAAGATGATGGTTGACCAGGACGTTGAGATGGCCAAGAAGGAGAAGGTTCTCGTTGATGCTGGCTACATTGATGCTCAGCAACAGCCTTGA 1059 0.5977 MENTEGSGSATNGAVDHAPARKVALITGITGQDGSYLTEFLLNKGYEVHGLIRRSSNFNTQRIDHIYVDPHNAHKARMKLHYADLSDASSLRRWLDTLLPDEIPDYTADVVATGALRLLEAVRSHIAASGRSNIRYYQAGSSEMFGSTAPPQSETTPFHPRSPYAVSKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEESHTVEEFLEVAFGNVGLNWRDHVVIDKRYFRPSEVDNLKGDASKAKKVLGWKPKVGFEQLVKMMVDQDVEMAKKEKVLVDAGYIDAQQQP 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1227 352 PANTHER GDP-MANNOSE 4,6 DEHYDRATASE 1-LIKE 10 347 - -
Aed11g1227 352 CDD GDP_MD_SDR_e 23 332 - -
Aed11g1227 352 Gene3D - 200 326 - -
Aed11g1227 352 PANTHER GDP-MANNOSE 4,6-DEHYDRATASE 10 347 IPR006368 GO:0008446|GO:0019673
Aed11g1227 352 Hamap GDP-mannose 4,6-dehydratase [gmd]. 22 336 IPR006368 GO:0008446|GO:0019673
Aed11g1227 352 Gene3D - 25 316 - -
Aed11g1227 352 Pfam GDP-mannose 4,6 dehydratase 25 326 IPR016040 -
Aed11g1227 352 TIGRFAM gmd: GDP-mannose 4,6-dehydratase 22 333 IPR006368 GO:0008446|GO:0019673
Aed11g1227 352 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 22 332 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1227 Aed-Chr11 17469078 17470180 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1227 K01711 - gmx:100777692 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1227 11 17469078 17470180 Aed11g1227 11 17469078 17470180 ECH