Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1222 ATGGACCGCCGGGGTTGGCTATGGAAGAAAAAACCTTCTGATAAAAACATAAAGGTTGAGAATGAGCAACCAGTGTCTGCATCTGAACCTGTTGGTCCTACCTTGTCTTTTGTGGCACATGTAGGAGATAAGCAAGACAACAGCAAAATTAAGAACTATGTTCAAATATCAATGGAATCATACACACGTATGTCTGGATTGGAAGATCAAGTTGTGAACTTGGAGGATCAAGTAGAAGCTTTGGAAGCAAAGCTATCTGCAGTTTATTCAGAATTAAATAACAAGGATAATCTAGTTAAACAGCATGCAAAAGTTGCTGAGGAAGCAGTCTCAGGTTGGGAGAAAGCTGATGCAGAAGTTGTTTCCTTAAGACGTCAACTTGACTCTTTGTCTCTATCTAAGCTCACTGTTGATGAGAAAGCAGCTCACCTAGATGAAGCCCTAAAAGAGTGCATGAAGCAGATAAGAACTGTAAAGGACGAAAGTGAGCATAAACTGCAGGAGGTGATTCTTATGAAATCCCATCAGTGGGAGAAAGTCAAGTTAGAACTTGAAGCACAAATAGACAATTTGGATGAAGGACTTCGTGAGTTAGCCAGTGAAAATACCACCCTTCTAAGATCAGTTCAAGAAAGTTCGAACAAAATAGTGAAACTAAAAGAAGAGAAGTCTGAAGCAGAGGCAGAAGTAGAGCTTCTAGAGAAGAGTGTTCAATCAAAAGAAAAAGAAATAACTTCACTGAAGTATGAACTGCACATGATTTCTAAGGAGTTGGATATCCGAAATGAAGAGAAGAATATGATTATGAGATCAGCAGAAGTGGCAAACAAGCAACACACTGAGGATGTCAAGAACATTGCCAAGCTAGAAAGTGAGTGTCAACGACTCCGTTGTCTTTTGAGAAAGAAGTTGCCTGGGCCTGCTGCATTGGCACAAATGAAGCTAGAAGTTGAGAGTTCACACCATGTCATCAGTGCAGCCCATCTAAGAAAAACTAGTTCAAAAACTGATAGCCTGCAAGAATCTGAGTTTCTTACTAAACAGTTGGAGGTGTTGGAAGAAGAAACAAAGACATTGAAAGAAGCATTGGCCTCAAATCATGCTGAACTGCAGGCTTCTAGAAACTTGTATGCTAAGACGGTTGGCAGACTTAAGCGCTTGGAAGCAGAGATACATCAAGAAAGAAACGCCCCGAAAGCATTTTCGGTAACCAGTTATGGAAACTCCATGAGGAGAATTTATAGCTACCCACCAAGCATCACTTCTATCTCTGACAATGGGCATGAGGATTCAGAAAGTCCTGTTGAGTCGTGTGCAGCATCAATTCCTGACCATTCTGATATCAAAAGGATTGGAAATGTAGGTAAGTTTGAGAATCATAAGAGTGAAACTATGTCAGAACTGATGGATGACTTTCTGGAAGTGGAGAAGATGGCATGTTTATCAGACAATGATGTTGCTGAAGATCAAAAGGAGAGTAGCTGTTTATCTTCAAATAAAAGTTGTTTTGACAGGACAAACCAAACAATAGAACCTGAGGCAGCTGAACATGATGAGCATATGCAAGATCTTAAGGGAAAAAGGATGATGTTACAGGAAAACATGCAGCTTCTAGAAGAAATGAAAGCACAATTGGCATTGTCTCATAAATCATGTAGTTTGGCTGAGATTCAACTGAAATGTATGACTGAGTCTTACAAGTCACTTCAAACACATGTAGAGGAGTTAGAAGCTGAAAATAAGTATTTAAAGGAAAAGATGGATGAGCTAAAGAATGATCTTGCAGAGGAAAAACAAAGCCATCATGATGCTTTGGTGAGGTACAAAGAAATTGAAGAGAAAATTCAAAGGGACCACTGTTTGGTGTGTGCATCAAATTCGGCAGCAAATTCTGGGAAGGATAAAGAGCTAGCAGCTGCAGAGAAAAAGCTGGCAGAATGTCAGGAGACTCTGTCTAGACTTGGTAAGCAATTGCAAGCTATGTGCCCTCAGATAGGGGTAACCATGACTCATCATAGTAAAAGGCTTCAAATGAATGAAAAGTTAGCCAAACCAACTTATGGCTGGTCAAATTCTTATGGCTCGTGTAACTCAAATGAAATTGATCGTGCTGAGGCTTGTAGCGTAGTGTCTGACATTCAAGGAGTGACTGATGAGTTTTCACCACATAATAACTCTGGTGCCACATCATGTCTTTCAGACACCGAAGGCAACTTTTGGTTAAACTCTTAA 2232 0.401 MDRRGWLWKKKPSDKNIKVENEQPVSASEPVGPTLSFVAHVGDKQDNSKIKNYVQISMESYTRMSGLEDQVVNLEDQVEALEAKLSAVYSELNNKDNLVKQHAKVAEEAVSGWEKADAEVVSLRRQLDSLSLSKLTVDEKAAHLDEALKECMKQIRTVKDESEHKLQEVILMKSHQWEKVKLELEAQIDNLDEGLRELASENTTLLRSVQESSNKIVKLKEEKSEAEAEVELLEKSVQSKEKEITSLKYELHMISKELDIRNEEKNMIMRSAEVANKQHTEDVKNIAKLESECQRLRCLLRKKLPGPAALAQMKLEVESSHHVISAAHLRKTSSKTDSLQESEFLTKQLEVLEEETKTLKEALASNHAELQASRNLYAKTVGRLKRLEAEIHQERNAPKAFSVTSYGNSMRRIYSYPPSITSISDNGHEDSESPVESCAASIPDHSDIKRIGNVGKFENHKSETMSELMDDFLEVEKMACLSDNDVAEDQKESSCLSSNKSCFDRTNQTIEPEAAEHDEHMQDLKGKRMMLQENMQLLEEMKAQLALSHKSCSLAEIQLKCMTESYKSLQTHVEELEAENKYLKEKMDELKNDLAEEKQSHHDALVRYKEIEEKIQRDHCLVCASNSAANSGKDKELAAAEKKLAECQETLSRLGKQLQAMCPQIGVTMTHHSKRLQMNEKLAKPTYGWSNSYGSCNSNEIDRAEACSVVSDIQGVTDEFSPHNNSGATSCLSDTEGNFWLNS 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1222 743 Coils Coil 64 91 - -
Aed11g1222 743 Coils Coil 335 397 - -
Aed11g1222 743 Coils Coil 209 250 - -
Aed11g1222 743 Coils Coil 521 541 - -
Aed11g1222 743 Pfam Filament-like plant protein, long coiled-coil 95 504 IPR008587 -
Aed11g1222 743 Pfam Filament-like plant protein, long coiled-coil 519 664 IPR008587 -
Aed11g1222 743 MobiDBLite consensus disorder prediction 1 18 - -
Aed11g1222 743 SUPERFAMILY Tropomyosin 62 263 - -
Aed11g1222 743 Coils Coil 559 607 - -
Aed11g1222 743 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 743 - -
Aed11g1222 743 MobiDBLite consensus disorder prediction 1 32 - -
Aed11g1222 743 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 743 - -
Aed11g1222 743 Coils Coil 630 657 - -
Aed11g1222 743 Coils Coil 181 201 - -
Aed11g1222 743 Coils Coil 141 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1222 Aed-Chr11 17438947 17442121 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1222 - - gmx:100803281 1227.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1222 11 17438947 17442121 Aed11g1222 11 17438947 17442121 ECH