Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1208 ATGGCTGCTGCTGCGGTTACTGCTGCAGTGTCATTTCCAGCCACCAAGTCCACCTCTCTTTCAAGCAGAACCTCTGTCACTGCCCCAGATAGAATAGTCTTCAAGAAGGTTTCATTGCAAAGCAGTAGTGGAAGGGTAGTTTCCATCAGAGCCACCCAAGTGACCACAGAGGCACCTGCTGCTAAGGTTGAAAAGGAATCCAAGAAACAAGAGGAAGGTGTGGTTGTCAATAAGTTCAAACCAAAGAACCCATATACTGGTAGGTGTCTTCTCAACACTAAGATCACTGGGGATGATGCACCTGGAGAAACTTGGCACATGGTCTTCAGCACTGAGGGAGAAGTTCCTTACAGAGAAGGACAATCAATCGGGGTAATTGCTGATGGGGTTGACAAGAATGGAAAGCCTCACAAGCTCAGATTGTATTCAATTGCTAGCAGTGCCCTTGGTGATTTTGGAGATTCCAAAACTGTTTCTTTATGCGTGAAACGTCTTGTGTACACAAATGAAAACGGAGAACTTGTCAAGGGAGTTTGCTCTAATTTTTTGTGTGACTTGAAACCAGGAGCTGAAGTAAAGATTACTGGACCTGTTGGTAAAGAAATGCTTATGCCAAAAGATCCTAATGCCACCGTCATCATGTTGGGTACTGGAACTGGAATTGCCCCATTCCGCTCATTTTTATGGAAAATGTTCTTTGAGAAGCATGATGATTACAAGTTCAATGGTTTGGCATGGCTCTTCTTGGGTGTCCCTACAAGCAGCTCACTACTTTATAAGGAGGAATTTGAAAAGATGAAGGAGATAGCACCTGAGAACTTCAGGCTTGACTTTGCTGTGAGCAGAGAGCAAACAAACGAAAAAGGAGAGAAGATGTACATTCAAACACGAATGGCTCAGTATGCAGAAGAGTTATGGGAGTTACTCAAGAAAGATAACACTTTTGTCTACATGTGTGGACTCAAAGGAATGGAAAAGGGAATCGATGACATCATGGTTTCATTGGCTGCAAAAGATGGTATCGATTGGATTGAGTACAAGAGGCAATTGAAGAAGGCAGAACAATGGAATGTCGAAGTTTACTAA 1086 0.4319 MAAAAVTAAVSFPATKSTSLSSRTSVTAPDRIVFKKVSLQSSSGRVVSIRATQVTTEAPAAKVEKESKKQEEGVVVNKFKPKNPYTGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGELVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEIAPENFRLDFAVSREQTNEKGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDGIDWIEYKRQLKKAEQWNVEVY 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1208 361 PIRSF FNR-PetH 2 361 IPR035442 GO:0016491
Aed11g1208 361 Gene3D - 199 361 IPR039261 -
Aed11g1208 361 SUPERFAMILY Riboflavin synthase domain-like 64 205 IPR017938 -
Aed11g1208 361 Gene3D Translation factors 52 198 - -
Aed11g1208 361 PANTHER - 3 361 IPR015701 GO:0016491
Aed11g1208 361 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 202 361 IPR039261 -
Aed11g1208 361 Pfam Oxidoreductase NAD-binding domain 214 328 IPR001433 GO:0016491
Aed11g1208 361 CDD CYPOR_like_FNR 77 361 - -
Aed11g1208 361 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 82 204 IPR017927 GO:0016491
Aed11g1208 361 PANTHER FERREDOXIN--NADP REDUCTASE, LEAF ISOZYME 1, CHLOROPLASTIC 3 361 - -
Aed11g1208 361 PIRSF Frd-NADP+_RD 1 361 IPR015701 GO:0016491
Aed11g1208 361 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 140 147 IPR001709 GO:0016491
Aed11g1208 361 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 291 307 IPR001709 GO:0016491
Aed11g1208 361 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 213 232 IPR001709 GO:0016491
Aed11g1208 361 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 255 266 IPR001709 GO:0016491
Aed11g1208 361 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 117 127 IPR001709 GO:0016491
Aed11g1208 361 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 315 323 IPR001709 GO:0016491
Aed11g1208 361 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 243 252 IPR001709 GO:0016491
Aed11g1208 361 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 177 186 IPR001709 GO:0016491
Aed11g1208 361 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1208 Aed-Chr11 17327160 17329800 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1208 K02641 - gmx:100802032 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1208 11 17327160 17329800 Aed11g1208 11 17327160 17329800 ECH