Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1201 GCGTTTTTCCAAAGATGGTGGGTGGAACAAACTCCACAAACACAGGTTCAAGTGAGAAAGCTTGTGGATGCTGGCCAGCTAGAATTTATAAATGGTGGTTGGTGCATGCATGATGAAGCAACGACTCATTACATAGACATGATTGATCAAACCACTCTTGGTCACCGCTTCATCAAAAACCAGTTCAACATGGTCCCTCGTGCAGGGTGGCAGATTGATCCATTTGGACACTCTGCTGTTCAAGCCTACTTGTTTGGTGCTGAGCTTGGTTTTGACTCTGTGCACTTCGCTAGGATTGATTATCAGGACAGAGCTAAGCGCACAGTTGATAAAACTCTTGAAGTTGTGTGGCGCGGCTCCAAGACATTTGGCTCTTCAGCTCAGATCTTTGCCAACACTTTTCCTGTTCATTATAGTCCCCCAGAAGGTTTTCATTTTGAAGTCAATGATGACTTTGTTCCCGTACAGGATGATCCCCTTCTATCTGAGAACAATGTTGAACAGCGAGTCAAGGACTTCATTGCTGCTGCTATTACACAAGCAAATGTGACTAGGACAAACCATATCATGTGGACAATGGGCGATGATTTCCAGTACCAATATGCAGAGACTTGGTTCAAGCAAATGGATAAACTAATTCACTATGTTAATAAGGATGGCAGAGTGAATGCTTTATATTCTACTCCATCTATTTACACCGATGCAAAAAATGCTGCAAATCAACAATGGCCACTGAAAACCGATGATTACTTCCCTTATGCAGATGGACCAAATGGTTATTGGACAGGCTATTTCACTAGTCGCCCAGCCTTTAAGCGATACGTGAGGATCCTCAGTGGATACTATTTGGCAGCGCGTCAACTTGAATTTTTTGCGGGAAAGAAATCCAGTCTAGGCCACACTTTAGACCTTGGAGATGCTCTTGGCATTGCACAGCATCATGATGCTGTCTCTGGCACTGCCAAACAACACACAACTAATGACTATGCAAAACGACTAGCTATTGGAGCCTCAAGGGCTGAAGCTGTTGTTAGTTCTTCTTTGTATTGTCTTACTAGCAAGAAATCAGGGGTTCAATGCTCAGCACCTACACCAGCATTTTCCCAGTGTCAATTAGTTAACATCAGTTACTGCCCACCAACAGAAGACAGTATTTCACAAGCGAAGAGTTTGGTATGTTATCATATTTTGTTTAGAAAATTTGGTTATTTGTTTTACTCAACACGTGCTAATGATTTCTCCCAGGTATTAGTGGTTTATAACCCACTTGGATGGAATCGCAGTGGCATTGTTAGAATACCAGTTAATGACGCTAATCTTGTAGTCAAAGATTCATTGGGCGATGACGTTGAAACACAATATATAGAAGTAGATAATGCTACAACAAATTTAAGAGAATTCTACGTCAAAGCTTGTGTGGGAGTGTCACCGAAACAAGCCCCAAAGTACTGGCTTCTGTTTAAGGCTTCGGTACTTCCACTTGGATGGACTACGTATTTCATTTCTAATACAGCAAAAATAGGCAAAAGCAGAAATGGATTTGTCTCAAACCTCAGCAGTGAGAACAAAGATATCATTGAAGTAGGTCCGGGAAATTTAAAGCTGTCATTTTCTTCAGAGTCCGGACAACTCATACGGATGCATAATTCCAGAACTGGAGTAGATGTACCAATCCAGCAAAGCTATCTCTGGTATAATTCTAGTCAAGGCGCAGATCAGGGTTCTGGTGCATATATCTTTCGGCCTGATACCCCTCCAAATATTGTTTCAAGATCGGTGCCTATCAAGATAATCCGCGGACCATTAGTAGATGAGGTTCACCAGAATTTTAGTTCTTGGATTTACCAGGTTACTAGGGTTTACAAAGACAAAGAGCATGCTGAGATTGAATACACTATTGGTCCAATTCCTATGGAGGATAATGTTGGGAAAGAGGTGATCACGCAAATGACAGCAAATATGGTTACAAACAAAAAGTTTTATACTGATTCTAATGGAAGAGATTTTCTGAAACGGGTTCGAGATCATAAGGATGATTGGTCCCTTGAAGTTCATGAACCAGTAGCAGGCAACTATTATCCACTCAATCTTGGAATTTATATTAAGGATAAGAAATCTGAATTATCAGTCTTAAATCAGACATATTGTATAGTTCAAAAATGGGTTTGTGCTTCAATTTCCATTACAATAACATTTGCTTTTAAGTGCTTGTTGGATAAAACACTACGTCTCCTAGTTGTGGGGAAAATGGTACCTAATCAAACTTACAATGCTCTCCACATATACAGTGTATGGAATTCCTATGCCCTTTCTGTGGTAAGAGGAAATTATTATGTAGGCATCCACAACCTTGGAGCTGGTTCACGCTGGCGCCGCACAACTGGTCAGGAAGTTTATTCACCACTATTATTGGCTTTTTCACATGAGAACTTGGAAAACTGGAAGACCTTTCATGTGACCAAAGGAACTGTCATTGACCCTAACTACAGTTTACCTCCCAATGTTGCTCTGATAACTCTTGAGGTTTGTTCGCAGGAGTTGGATAATGGAATGGTGCTTCTCCGTTTGGCACACCTCTATGAGGCTGGTGAAGATGCTCAGCTTTCAACTTTGACCAAAGTTGAATTGAAGAAAATCTTTGCCACAAAAATGATAAGGGGATTGACTGAGGTCAGTTTATCAGCTAACCAAGAGAAATCAAAAATGAAGAAAAAAACATGGAACGTTGCAGGGGACAAGGGGCAAGAATCTAAAGCAGTTAGGGTGGCCCTGTCAGCCTTATCAATCTTGTAG 2793 0.411 AFFQRWWVEQTPQTQVQVRKLVDAGQLEFINGGWCMHDEATTHYIDMIDQTTLGHRFIKNQFNMVPRAGWQIDPFGHSAVQAYLFGAELGFDSVHFARIDYQDRAKRTVDKTLEVVWRGSKTFGSSAQIFANTFPVHYSPPEGFHFEVNDDFVPVQDDPLLSENNVEQRVKDFIAAAITQANVTRTNHIMWTMGDDFQYQYAETWFKQMDKLIHYVNKDGRVNALYSTPSIYTDAKNAANQQWPLKTDDYFPYADGPNGYWTGYFTSRPAFKRYVRILSGYYLAARQLEFFAGKKSSLGHTLDLGDALGIAQHHDAVSGTAKQHTTNDYAKRLAIGASRAEAVVSSSLYCLTSKKSGVQCSAPTPAFSQCQLVNISYCPPTEDSISQAKSLVCYHILFRKFGYLFYSTRANDFSQVLVVYNPLGWNRSGIVRIPVNDANLVVKDSLGDDVETQYIEVDNATTNLREFYVKACVGVSPKQAPKYWLLFKASVLPLGWTTYFISNTAKIGKSRNGFVSNLSSENKDIIEVGPGNLKLSFSSESGQLIRMHNSRTGVDVPIQQSYLWYNSSQGADQGSGAYIFRPDTPPNIVSRSVPIKIIRGPLVDEVHQNFSSWIYQVTRVYKDKEHAEIEYTIGPIPMEDNVGKEVITQMTANMVTNKKFYTDSNGRDFLKRVRDHKDDWSLEVHEPVAGNYYPLNLGIYIKDKKSELSVLNQTYCIVQKWVCASISITITFAFKCLLDKTLRLLVVGKMVPNQTYNALHIYSVWNSYALSVVRGNYYVGIHNLGAGSRWRRTTGQEVYSPLLLAFSHENLENWKTFHVTKGTVIDPNYSLPPNVALITLEVCSQELDNGMVLLRLAHLYEAGEDAQLSTLTKVELKKIFATKMIRGLTEVSLSANQEKSKMKKKTWNVAGDKGQESKAVRVALSALSIL 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1201 930 Gene3D - 407 525 IPR013780 -
Aed11g1201 930 Gene3D - 526 715 - -
Aed11g1201 930 SUPERFAMILY Families 57/38 glycoside transferase middle domain 259 359 IPR028995 -
Aed11g1201 930 Gene3D - 824 929 - -
Aed11g1201 930 PANTHER ALPHA-MANNOSIDASE 413 919 - -
Aed11g1201 930 PANTHER ALPHA-MANNOSIDASE 1 393 - -
Aed11g1201 930 Gene3D Glycoside hydrolase family 38, central domain 301 357 IPR037094 GO:0004559|GO:0006013
Aed11g1201 930 SUPERFAMILY Galactose mutarotase-like 364 712 IPR011013 GO:0003824|GO:0005975|GO:0030246
Aed11g1201 930 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 834 896 IPR041147 -
Aed11g1201 930 PANTHER ALPHA-MANNOSIDASE 1 393 - -
Aed11g1201 930 Pfam Glycosyl hydrolases family 38 N-terminal domain 1 254 IPR000602 GO:0004559|GO:0006013
Aed11g1201 930 Gene3D Glycoside hydrolase family 38, central domain 223 300 IPR037094 GO:0004559|GO:0006013
Aed11g1201 930 Pfam Alpha mannosidase middle domain 260 350 IPR015341 GO:0004559|GO:0006013
Aed11g1201 930 SUPERFAMILY Glycoside hydrolase/deacetylase 1 257 IPR011330 GO:0005975
Aed11g1201 930 Gene3D Glycoside hydrolase 38, N terminal domain 1 222 IPR027291 -
Aed11g1201 930 PANTHER ALPHA-MANNOSIDASE 413 919 - -
Aed11g1201 930 SUPERFAMILY Galactose mutarotase-like 772 907 IPR011013 GO:0003824|GO:0005975|GO:0030246
Aed11g1201 930 SMART Alpha_mann_mid_2 259 333 IPR015341 GO:0004559|GO:0006013
Aed11g1201 930 Pfam Glycosyl hydrolases family 38 C-terminal domain 530 713 IPR011682 GO:0004559|GO:0006013
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1201 Aed-Chr11 17289260 17295653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1201 1 886 Glycoside Hydrolase AT3G26720 55.034 0.0 974
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1201 K01191 - gmx:100806041 1517.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1201 11 17289260 17295653 Aed11g1201 11 17289260 17295653 ECH