Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1198 ATGGCTTCTCAAAACCCTAATCAGAGAAATTTCATGTATCCACAAGTAATCGATTCTAACCCCGATGCTCCTTCACCTCTCCTTAATCCCAATCACTCATCATCCTCTTCGCAACCTAGCCTCTACCCTTCCATTGACCTCAACGACCTCGTCGAAAACCTCTTCACCGAGGATGCCACCACCGCCGCCGGTTCCCCCACCGCCCCTCCGCTGGCCACTGAGGAGGTCCTCCTCCGTATCCCCGGCGCGATCCTCAACCTCGTCGACAAGGACTACAGCGTCGAGCTCGCGTGCGGCGACTTCTCCGTGATCCGCCTCCGGCAGGGCGACAACGCCGTCGCGGTGTACGCGCGCGTTTCCGATGAGATCCAATGGCCGTTGGCGAAGGACGCCACCGCCGTGAAAGTCGACGATTCACACTACTTCTTCTCGTTCCGCGTCCCTAAGGGTTCCGAACCCGACGAGGAGGAAGATGTGCTCAGCTACGGGTTAACGATCGCGTCGAAGGGGCAGGAGGGGCTGCTGAAGGATCTCGACGCGGTTTTGGAGAACTGCAGCTGTTTCTCAGTGCAGAGCGTTTCGGAGAATGCGAAGAAGAAAGGGGAGGCTCTGGATGGGACCGTTGCGAAGGAGGTTTCGCCGAAGGATATGGAGTCGTCGGGGAAGAAGAAGGAGATGATGGAGGAGCGGTGCGCGGCGTATTGGACCACGCTGGCGCCCAATGTAGAGGATTACAGTGGAAAATCAGCGAGGATGATCGCTGCAGGGTCTGGACACGTGGTTAAGGGGATTCTGTGGTGCGGGGATGTGACCGTGGACAGGTTGAAATGGGGGAATCAGGTTATGAAGAAGAGGATCACTCCTGGTTCACCTGCTGAGGTTAGTCCTCAGACATTGAAGCGGATTAAAAGGGTTAAGAGAGTTACTAAAATGACAGAGAAAGTAGCAAATGGTTTCCTCTCTGGGGTCGTGAAAGTGTCTGGATTTTTCACCAGTTCAGTGATAAACTCAAAAGCCGGAAAGAAATTTTTCAGCTTTCTCCCGGGGGAAGTTCTGCTTGCATCGTTGGATGGATTCGGTAAAGTGTGTGATGCTGTCGAAGTAGCTGGAAAAAATGTCATGTCAACATCATCAACTGTGACAACTGAGCTTGTCGATCACAGATATGGAGAACAAGCAGCTGAAGCAACAAGTGAAGGGTTTAGTGCTGCAGGTCATGCTTTTGGTACTGCATGGGCTGCTTTTAAGATTAGGAAGGCTATCAACCCTAAGAGTGTTCTTAAACCTACCTCCCTTGCCAAAGCTGGTGCTAAAGCTGCAGCTTCTGAATTTAAGGGTAAAAATTCCAAGTAA 1353 0.5233 MASQNPNQRNFMYPQVIDSNPDAPSPLLNPNHSSSSSQPSLYPSIDLNDLVENLFTEDATTAAGSPTAPPLATEEVLLRIPGAILNLVDKDYSVELACGDFSVIRLRQGDNAVAVYARVSDEIQWPLAKDATAVKVDDSHYFFSFRVPKGSEPDEEEDVLSYGLTIASKGQEGLLKDLDAVLENCSCFSVQSVSENAKKKGEALDGTVAKEVSPKDMESSGKKKEMMEERCAAYWTTLAPNVEDYSGKSARMIAAGSGHVVKGILWCGDVTVDRLKWGNQVMKKRITPGSPAEVSPQTLKRIKRVKRVTKMTEKVANGFLSGVVKVSGFFTSSVINSKAGKKFFSFLPGEVLLASLDGFGKVCDAVEVAGKNVMSTSSTVTTELVDHRYGEQAAEATSEGFSAAGHAFGTAWAAFKIRKAINPKSVLKPTSLAKAGAKAAASEFKGKNSK 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1198 450 Pfam Senescence domain 252 437 IPR009686 -
Aed11g1198 450 PANTHER SPARTIN 155 450 IPR045036 -
Aed11g1198 450 MobiDBLite consensus disorder prediction 1 15 - -
Aed11g1198 450 PANTHER SPARTIN 1 151 IPR045036 -
Aed11g1198 450 MobiDBLite consensus disorder prediction 1 42 - -
Aed11g1198 450 PANTHER SENESCENCE/DEHYDRATION-ASSOCIATED-LIKE PROTEIN 155 450 - -
Aed11g1198 450 PANTHER SENESCENCE/DEHYDRATION-ASSOCIATED-LIKE PROTEIN 1 151 - -
Aed11g1198 450 MobiDBLite consensus disorder prediction 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1198 Aed-Chr11 17275527 17280329 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1198 K19366 - gmx:100805032 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1198 11 17275527 17280329 Aed11g1198 11 17275527 17280329 ECH