Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1192 ATGGCTTCCACTGCCTCCAATTTCTCTCTTTCTCTCCGCACCACCCAACATTCAACTCCAATTCCCAAACCCTCTTTCTTCTCCCACAACCATTTGCACTTCAACTCTTCTACTAATTGGGCCTGGGCCTCTGTTTCCACCTTAAACAACAACAAGTCAAGGATATGCGCTACTTCCTCTCAAGTTATGGACCCCTTCGCTGCAAAATCCGAACCCGAACCCACCACCGTCGAAGTCGATTTGGGTGATCGGAGCTATCCCATTTACATCGGATCCGCATTACTCAACCAACCCCAATATCTCCAAAGGCATGTTCATGGAAAGAGGGTCCTAGTTGTAACTAACGAAACCGTTGCGCCGCTTTATCTAGACAAGGTTGTTGATGCTTTGACAAGGGGCAACCCCAATGTTTCTGTCGAGAATGTCATTTTACCCGATGGTGAGCAGTACAAGGACATGGATACTCTCATGAAAGTCTTTAACAAGGCCATCGAATCGCGACTAGACCGGCGCTGTACGTTTGTCGCTCTTGGTGGTGGCGTCATTGGTGACATGTGTGGCTTTGCTGCTGCTTCCTTCTTACGTGGTGTTAATTTTATTCAGATTCCTACCACTGTCATGGCACAGGTTGATTCTTCAGTTGGTGGCAAAACTGGGATAAATCATCACCTTGGGAAGAACCTGATCGGTGCCTTTTACCAACCTCAGTGTGTGCTGATAGACACGGACACATTAAACACACTACCAGACAGAGAACTGGCATCTGGGCTTGCAGAGGTTATAAAGTATGGCCTCATTAGGGATCCAGAGTTTTTTGAGTGGCAAGAGAAAAATATGCACGCATTACTGGCAAGAGATCCTAGTGCACTGGCATATGCTATAAAGCGATCTTGTGAAAACAAGGCTGAGGTTGTGTCCTTAGATGAGAAAGAAAGTGGAGTGAGGGCAACATTGAACTTGGGTCATACATTTGGTCATGCAATAGAAACTGGGGTTGGCTATGGTCAGTGGTTTCATGGAGAGGCTGTTGCAGCTGGCACGGTAATGGCTGTTGACATGTCATATCGCCTAGGTTGGATTGATGATTCTCTGGTGAAGCGAGTTGGAGACATTTTAAAACAGGCTACGTTACCTACAGCTCCTCCTGAGATCATGACTGTAGACATGTTTAAATCTGTCATGGCGGTGGATAAGAAGGTAGCAGATGGGTTGCTAAGGCTTATCCTTCTAAAAGGTCCTCTTGGCAATTGTGTTTTCACGGGGGATTATGACAGAAAGGCTCTAGACGATACACTTCATGCATTCTGTAAATCCTGA 1317 0.4624 MASTASNFSLSLRTTQHSTPIPKPSFFSHNHLHFNSSTNWAWASVSTLNNNKSRICATSSQVMDPFAAKSEPEPTTVEVDLGDRSYPIYIGSALLNQPQYLQRHVHGKRVLVVTNETVAPLYLDKVVDALTRGNPNVSVENVILPDGEQYKDMDTLMKVFNKAIESRLDRRCTFVALGGGVIGDMCGFAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHHLGKNLIGAFYQPQCVLIDTDTLNTLPDRELASGLAEVIKYGLIRDPEFFEWQEKNMHALLARDPSALAYAIKRSCENKAEVVSLDEKESGVRATLNLGHTFGHAIETGVGYGQWFHGEAVAAGTVMAVDMSYRLGWIDDSLVKRVGDILKQATLPTAPPEIMTVDMFKSVMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDDTLHAFCKS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1192 438 Pfam 3-dehydroquinate synthase 142 400 IPR030960 -
Aed11g1192 438 PANTHER 3-DEHYDROQUINATE SYNTHASE 74 434 - -
Aed11g1192 438 TIGRFAM aroB: 3-dehydroquinate synthase 86 426 IPR016037 GO:0003856|GO:0005737|GO:0009073
Aed11g1192 438 SUPERFAMILY Dehydroquinate synthase-like 77 428 - -
Aed11g1192 438 Hamap 3-dehydroquinate synthase [aroB]. 74 436 IPR016037 GO:0003856|GO:0005737|GO:0009073
Aed11g1192 438 Gene3D - 248 438 - -
Aed11g1192 438 PANTHER 3-DEHYDROQUINATE SYNTHASE, CHLOROPLASTIC 74 434 - -
Aed11g1192 438 CDD DHQS 85 432 - -
Aed11g1192 438 Gene3D - 64 247 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1192 K01735 - gmx:100806628 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1192 11 17243566 17247175 Aed11g1192 11 17243566 17247175 ECH