Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1142 ATGGCCTGTCTGAGCCACCGCCACCCTCGCCTCGACGACAAGCTCAAACGCTGCCCTCTCTCCGCCCACCACCGCCGTCTCCCCTCCCTCTCCTCCGCCTACCGCATCTTCCCTGTTTACGCCATGTGCGCCCCCGACCCCAGCCCCGAACCCGACCTGGAAGGACCCGACCCAATTTGGAACGCCGTCAGGGACGAGGCCAAGCTCGAGGCAAGTCCATCATCTTTCGCGGAGAAGGAGCCAATTCTGAGTAGCTTCTTGTACGCTAGCATATTGGCGCATGATTGCTTGGAGCAAGCATTGGCGTTTGTGGTGGCCAACCGTCTCCAAAACCCTACTCTCTTGGCCACTCAGCTTATGGATATTTTCTGCAATGTCATTCTGCATGACAAACCTATCCAACGATCCATTCGCCTCGATGTTCAGGCATTTAAAGATCGGGACCCTGCTTGTTTGTCGTATTGCTCCGCGCTTTTGTATATGAAGGGTTACCATGCACTGCAAGTACATCGAGTAGCCCACGTATTGTGGCACCAGGGACGCAAAGTCTTGGCCCTGGCTTTGCAAAGCCGTGTTAGTGAGGTTTTTGGAGTGGACATTCATCCAGCTGCGAAAATTGGGGAGGGGATTTTATTAGATCATGGGACAGGTGTGGTTATTGGTGAAACTGCTATTGTTGGAAACAGAGTTTCACTTATGCATGGTGTAACATTAGGAGGCACGGGGAAGGAAATAGGTGATCGCCATCCCAAGGTAGGTGAAGGAGCACTAATTGGAGCTAGTGCAACTATACTTGGGAATATCAAGATTGGTGAAGGTGCGATGATAGCTGCGGGCTCCCTGGTGTTAAAAGATGTCCCTCCCAACAGCATTGTGGCAGGAATACCAGCTAAAGTTATTAGTAGTTTACAGGAGCCTGACCCATCTTTAACCATGAAGCATGATGCTACTAAAGATTTTTTCACACAAGTAGCTGCTAACTTCATCGATGAAAAGCCCAATGGAACTCAAAATCCAGATAGAAATGATGTGAACAATTAG 1041 0.5014 MACLSHRHPRLDDKLKRCPLSAHHRRLPSLSSAYRIFPVYAMCAPDPSPEPDLEGPDPIWNAVRDEAKLEASPSSFAEKEPILSSFLYASILAHDCLEQALAFVVANRLQNPTLLATQLMDIFCNVILHDKPIQRSIRLDVQAFKDRDPACLSYCSALLYMKGYHALQVHRVAHVLWHQGRKVLALALQSRVSEVFGVDIHPAAKIGEGILLDHGTGVVIGETAIVGNRVSLMHGVTLGGTGKEIGDRHPKVGEGALIGASATILGNIKIGEGAMIAAGSLVLKDVPPNSIVAGIPAKVISSLQEPDPSLTMKHDATKDFFTQVAANFIDEKPNGTQNPDRNDVNN 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1142 346 PANTHER SERINE ACETYLTRANSFERASE 27 329 - -
Aed11g1142 346 Pfam Bacterial transferase hexapeptide (six repeats) 249 282 IPR001451 -
Aed11g1142 346 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 258 286 IPR018357 GO:0016740
Aed11g1142 346 Pfam Serine acetyltransferase, N-terminal 59 168 IPR010493 GO:0005737|GO:0006535|GO:0009001
Aed11g1142 346 Gene3D serine acetyltransferase, domain 1 47 198 IPR042122 -
Aed11g1142 346 SUPERFAMILY Trimeric LpxA-like enzymes 69 313 IPR011004 -
Aed11g1142 346 Gene3D Hexapeptide repeat proteins 199 327 - -
Aed11g1142 346 SMART SATase_N_2_a 59 169 IPR010493 GO:0005737|GO:0006535|GO:0009001
Aed11g1142 346 CDD LbH_SAT 196 296 IPR045304 -
Aed11g1142 346 PANTHER SERINE ACETYLTRANSFERASE 2-RELATED 27 329 - -
Aed11g1142 346 TIGRFAM cysE: serine O-acetyltransferase 137 298 IPR005881 GO:0005737|GO:0006535|GO:0009001
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1142 Aed-Chr11 16935381 16939429 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1142 37 335 Miscellaneous Gene Families AT2G17640 70.100 8.51e-149 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1142 K00640 - gmx:100775449 608.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1142 11 16935381 16939429 Aed11g1142 11 16935381 16939429 ECH