Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1141 ATGATGGATACTCACGCAGAAGATTCTGTCAAACCCGAGGAGCATTTGCCTGATGTGAATAATACTCACGTAGAAGATTCTGCCAAACCTGAGGAGCATTTACCTGACGTGAATAATACTCATGCAGAAGATTCTGCCAAACCTGAGGAGCATTTGCCTGATGTGAATAATACTCACGCAGAAGATTCTGCCAAACTTGAGGAGCATTTGCCTGATGTGAATAATCATTATGAAGATGGAAGCGATGAAAATCTTTTACTTGAAAATGGTTTGTCTGATGGCAATCAAGGTCCTGCTGATACTCATGATCAGCTTCTACAAATAGTTATGGACCTCAGTTTTCAAAATGACTTCTTGAAGTCCCAGTTTGAGGGATTTAAAAATGTAAACAGTGTACATAGTGACTCTAGTATACAGAAAAGAGTTGGTGGCTTGGAAGATGAGGAATCTGACATTGTGAAAGAACTAAAGGAAAATATACAATTGTTAAATAAAGAATTTATGGAAGAAAAACAAACAAGAATTGCATCAGAAGAGGCTTTGAAGCATCTTCAAACGGCATACTCAGAGGCAGAAGCAAAGTCTCAAGAGCTCTCTGAAAAGCTTGCAGAAGCCCAAACGAAGTTGGACCAAGAAATAAAAGAGCGTGAAGAGAAGTACTCTGAACTTGACTCCAAGTTTAATAGGCTTCACAAACGAGCAAAACAGCGCATTCAAGAAATTCAAAAGGAAAAAGATGATATTGAGGCCCGCTTCTCTGAGGTGAATGAAATTGCAGAGCGAGCATCATCCCAACAGTCAGCATTGCAACAAGAATTAGAGCGCACTAGGAAGCAAGCAAATGAGGCATTGAAAGCCATGGATGGTGATAGACAACAACTAAGAAGTGCAAACAACAATCTTCGAGATACCATTGAAGATTTAAGACGTTCATTGCAACCTAAAGAGAGTGCTATTGAGGCATTGCAACAGTCAGTTGCAGAAAAGGAACAGATGTTGGAAGATATGAGAGGGTTGCTTCAGGCTGCTGAAGAAAAAAGGCAAGCTGCACTAGCTGAGCTCTCAGCTAAACATCAAAAGAATATAGAGAGTTTGGAGGCTCAACTTAATGATGCATTGTCCGACAGAAGTAAGGCAACTGAATCCATTTCTTCACTGCAGGTTCTAGTTGCAGAAAAAGAATCCAGAATTGCAGAGATGGAAGCAGCATCAACAGGAGAAGCAGTACGACTCAGAGCAGCTGTGGAAAGTGTGAAAGGGGAGCTTTCTCATCTAAAAGAGGAGCATGAAAAAGAAAGGGAAAGCTGGGAGACTGCTTCTCAGGCACTTAAAGCAAAACTTGGAATTGCAGAGAGTAACTGCATACGTGCAGAAGTTGAAGTAGCAAAAATAAGAAGTCAGCTGGAATCAGAGTTATCCACACAAACAAGAATCCTCAATATGAGAGATGCTGCATTGTTGGCTGCCAAAGAAGAGATCAGCTCTCTTGAGAAGGAATTTGCTTCATACAAAGGTCGTGCACATGCACTTCTTCAAAAGAAGGATGCTGAACTGGCTACGGCTAAAGATTCTGAACAAGTCAAAGCTCTAGAGGAAGCTCTTAAAGAGGTTGAAGATGAAGTATTATCAATAACAGAAGAAAGGGATAGGGTTCTTCAAGATCTTCAATCTGCTATGGCTAATCATGAGAAAGAACTTGCAGAAAGAGATACAGCCCTTGAAAATGCTAAGCAACAGATAAGGAGCTTAGAAATAAAGCTTGACTCAGCTAATGCTAAACACCTAAAAGAGAAAGAGGAATGGGGACTAAGTCTTCAAAATGTAGAAGAAACATGGAGAATCAGATGCGAGGCAATGAAGGCTGAAAATGAAGCAACTGCTACAAAAGATATGCAAAAGGAATTGGAAGAGCTCAAACAGCGATGTAAACAACTGAAGGAAGAGCATGCTTCATTTCATGATCTTGCTGATAGAATGATTGAGGAGAAAGACTATGAAATATCCAGACTTTTAGATGAAAATAAGAATCTTCGTCATTCTCTTCAATCAAGATCACTGATTTTGGCTAGACAACAAGCCCAAAGAGAGGAAGAGCTAGCACAGTCACAGCGCCATATTTTAGCTCTTCAAGAAGAAATTGAGGAGCTTGAACGTGAGAATCGTCTCCACAGCCAACAGGATGAGTTTCGCAACATGGAAAGATCAAAGAAAAGGGAAGGTGTAGATATGACATATTTGAAAAATGTTATCTTAAAGCTGCTTGAGACTGGTGAAGTTGAGGTATTGCTACCAGTTGTTGGAATGTTGCTTCAGTTTAGTCCAGAAGAGATGCAGAAGTGTCAACAGGCATATCGTCACAACTCAGCAGATGTTCCACCACCAAGTCCTGCAAGTGATACTGCAGGATCTGGCCAATCACTTTTCTCAAGATTCACATTTTCATAA 2445 0.4041 MMDTHAEDSVKPEEHLPDVNNTHVEDSAKPEEHLPDVNNTHAEDSAKPEEHLPDVNNTHAEDSAKLEEHLPDVNNHYEDGSDENLLLENGLSDGNQGPADTHDQLLQIVMDLSFQNDFLKSQFEGFKNVNSVHSDSSIQKRVGGLEDEESDIVKELKENIQLLNKEFMEEKQTRIASEEALKHLQTAYSEAEAKSQELSEKLAEAQTKLDQEIKEREEKYSELDSKFNRLHKRAKQRIQEIQKEKDDIEARFSEVNEIAERASSQQSALQQELERTRKQANEALKAMDGDRQQLRSANNNLRDTIEDLRRSLQPKESAIEALQQSVAEKEQMLEDMRGLLQAAEEKRQAALAELSAKHQKNIESLEAQLNDALSDRSKATESISSLQVLVAEKESRIAEMEAASTGEAVRLRAAVESVKGELSHLKEEHEKERESWETASQALKAKLGIAESNCIRAEVEVAKIRSQLESELSTQTRILNMRDAALLAAKEEISSLEKEFASYKGRAHALLQKKDAELATAKDSEQVKALEEALKEVEDEVLSITEERDRVLQDLQSAMANHEKELAERDTALENAKQQIRSLEIKLDSANAKHLKEKEEWGLSLQNVEETWRIRCEAMKAENEATATKDMQKELEELKQRCKQLKEEHASFHDLADRMIEEKDYEISRLLDENKNLRHSLQSRSLILARQQAQREEELAQSQRHILALQEEIEELERENRLHSQQDEFRNMERSKKREGVDMTYLKNVILKLLETGEVEVLLPVVGMLLQFSPEEMQKCQQAYRHNSADVPPPSPASDTAGSGQSLFSRFTFS 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1141 814 Coils Coil 408 446 - -
Aed11g1141 814 MobiDBLite consensus disorder prediction 781 805 - -
Aed11g1141 814 MobiDBLite consensus disorder prediction 1 99 - -
Aed11g1141 814 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 79 783 - -
Aed11g1141 814 SMART 1grip 739 783 IPR000237 -
Aed11g1141 814 Coils Coil 319 403 - -
Aed11g1141 814 Gene3D - 207 365 - -
Aed11g1141 814 Coils Coil 181 311 - -
Aed11g1141 814 MobiDBLite consensus disorder prediction 1 83 - -
Aed11g1141 814 Coils Coil 145 173 - -
Aed11g1141 814 Coils Coil 486 506 - -
Aed11g1141 814 Pfam GRIP domain 740 779 IPR000237 -
Aed11g1141 814 Coils Coil 520 600 - -
Aed11g1141 814 Coils Coil 692 726 - -
Aed11g1141 814 PANTHER CROSSOVER SUPPRESSOR ON 3 OF GOWEN 79 783 - -
Aed11g1141 814 ProSiteProfiles GRIP domain profile. 736 783 IPR000237 -
Aed11g1141 814 Coils Coil 618 655 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1141 - - gmx:100795939 1267.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1141 11 16923852 16934996 Aed11g1141 11 16923852 16934996 ECH