Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1133 ATGATGGAGAAGGCAGATTCTGTGCAGAAGCTGTACACGTGCATGCGACTCTGGGAATTTCCGGATCAGTATGTGATTGAGCCAACGGATGGTTCTTCTGGTTCTTCTTTGGCTGTTAGTCGAGTTGATGGCTCGATGAAGCTCATCGATGAGGTTCCGGAATGCAGCTCACTTCGAGTTCCTAAGATTTTCACAATTTTCGGTGTTGTTGGGATGTTGAAGCTCTTGGCTGGATCATATTTGCTGGTTATAACTGAGCGTGAATCTGTTGGATCTTACACGGGGTATCCAATTTTCAAAATTTCAAAATTGAAGGTTTTTCCATGCGATAATTCTCTTAAAAATACCCCTCCTGAAAAGAAGAAAATAGAGATGGAATTTTCTGGGCTGCTTAATGTTGCTGAGAAAACCTCTGGTCTGTTCTTCTCATATGAAACTAATTTAACTCTCAGTGCACAACGCTTGAATGACCTGGGTGATGAGTCTAGATTGCTTCCCCTTTGGAGACAGTCAGAGCCTCGATTCCTATGGAACAATTATATGTTAGAAGTGCTCATAGATAACAAGCTTGAACCATACTTGCTTCCTGTAGTCCAAGGCAGTTTTCATCATTTTCAAGCAGCCATTGGGAAAGATATTATTGATGTCACTTTGATTGCTAGGAGATGCACAAGAAGAAATGGAACTCGGATGTGGAGAAGAGGAGCTGATCCCGATGGTTATGTTGCCAATTTTGTGGAAACAGAACAAATTATGCAGTTTAATGGGTATACTGCTTCATTAGTTCAGGTCCGTGGTTCAATCCCACTCCTCTGGAAGCAAATTGTTGACTTAACTTATAAACCAAAGTTTGAGTTAATGAAACTTGATGAAGCTCCACGAGTCCTAGAGAGGCATTTCTTAGATTTAAGGAAAAAATATGGGGCAGTATTGGCTGTGGATCTTGTTAACAAGCTTGGAGGAGAAGGGCGACTGTGTGAAAAATTTGGTGAAACAGTGCAGCATGTGGCTAGTAATGATGTAAGATATCTGCACTTTGATTTTCATCATGTCTGTGGGCACGTTCATTTTGATCGTCTCTCAATCCTTTATGATCAAATTTCAGATTTTCTTGAGAGAAATGGATATCTTCTGTTGAATGAAAAGGGAGAGAAAATGAAGGAGCAACTTGGAGTTGTTAGGACCAATTGTATTGATTGTTTAGACCGTACAAATGTAACTCAGAGCATGATAGGCCGAAATATGTTGGAATACCAGCTTAGAAGGCTTGGTGTCTTTGGTGCTGAAGAAACCATTAGTTCACATCCAAATCTGGATGAAAACTTTAAGATCTTGTGGGCTAATCATGGGGATGATATAAGTATTCAATACTCAGGAACTCCTGCTCTTAAAGGAGATTTTACCAGATATGGGCACCGCACAATGCAAGGGATAGTACAAGATGGTGTTAATGCTCTTCTACGATACTATTTCAATAATTTTTGTGATGGAACAAAGCAGGATGCAATTGATCTCGTGCAAGGACATTATATAGTTTCTGTCGGCCGAGATACAGCTGCTACTTCTCAGAAAGGAGGGCTTGAAGCTATAGCTTCATTTCCTCTGGCTTTTGGTCTGGTTTTGACTGGATTCCTCTTTGCAACCATGTCATTGAGGCAAGTTCAATACGATTTTCGACACTTCTTCTTTTCGCTGATGTGGGCGGGCATTAGCGTTGGCATAGCAGCATTTGTGAGGGCCAACGGTCGTGTTTTCTGCAACAGACCTCGCCTACACAATCCCCAGTGA 1788 0.4133 MMEKADSVQKLYTCMRLWEFPDQYVIEPTDGSSGSSLAVSRVDGSMKLIDEVPECSSLRVPKIFTIFGVVGMLKLLAGSYLLVITERESVGSYTGYPIFKISKLKVFPCDNSLKNTPPEKKKIEMEFSGLLNVAEKTSGLFFSYETNLTLSAQRLNDLGDESRLLPLWRQSEPRFLWNNYMLEVLIDNKLEPYLLPVVQGSFHHFQAAIGKDIIDVTLIARRCTRRNGTRMWRRGADPDGYVANFVETEQIMQFNGYTASLVQVRGSIPLLWKQIVDLTYKPKFELMKLDEAPRVLERHFLDLRKKYGAVLAVDLVNKLGGEGRLCEKFGETVQHVASNDVRYLHFDFHHVCGHVHFDRLSILYDQISDFLERNGYLLLNEKGEKMKEQLGVVRTNCIDCLDRTNVTQSMIGRNMLEYQLRRLGVFGAEETISSHPNLDENFKILWANHGDDISIQYSGTPALKGDFTRYGHRTMQGIVQDGVNALLRYYFNNFCDGTKQDAIDLVQGHYIVSVGRDTAATSQKGGLEAIASFPLAFGLVLTGFLFATMSLRQVQYDFRHFFFSLMWAGISVGIAAFVRANGRVFCNRPRLHNPQ 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1133 595 Pfam SacI homology domain 67 352 IPR002013 GO:0016791
Aed11g1133 595 ProSiteProfiles Sac phosphatase domain profile. 131 459 IPR002013 GO:0016791
Aed11g1133 595 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC6 10 594 IPR030069 GO:0052866
Aed11g1133 595 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 10 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1133 Aed-Chr11 16836281 16845367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1133 2 595 Acyl Lipid Metabolism Gene Families AT3G51460 73.826 0.0 961
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1133 K21797 - gmx:100796999 1159.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1133 11 16836281 16845367 Aed11g1133 11 16836281 16845367 ECH
Aed11g1133 11 16836281 16845367 Aed7g1281 7 10499512 10510517 PCT