Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1126 ATGACCCAACCCCAAGAGCCATTCTCTTACCCTCCCATTGACCCAGTCAACTTCGATCTCATCATCGTCGGCACCGCCCTATCGGAATCTGTCATCGCCGCCGCCGCCGCCGCCGTCGGCAAAACCCTCCTCCACCTCGACCCCAACTCCTTCTACGGCAGCCATTTCGCTTCCCTCTCCCTCCACGATCTCACTTCCTACCTCAATTCCCCGCATCCTCTCCCAGCCACCTCCGCCGCGGCAACCACCGACTCCGACGACATCGTCGTTGTCGACCTCGTCCACCAACCCCTCTGCTCCGACGCGGAAATCGTGACTTACGATGATTCCGCGTTCCTTAGCGAAAATTCGAGGAAATTCAACATCGATTTGGGAGGTCCAAGGGCGCTGTTCTGCGCGGACAAGATGATCGATCTGTTGATGAAATCCGGCGCGTCGCAGTATATGGAGTTCAAAGGAATCGACGAAAGCTTCGTTTATGAAACAAATGGAGGTTTGGCGAACGTGCCGGATTCTCGAGGAGCGATTTTCAGAGACAAGAAGCTTTCGCTGAAGGAGAAGAATCAGTTGATGAGGTTCTTCAAGCTGGTTCAGCAGCACCTTGATGTCACTCAGGAGGAGAAGATTTCGGAGGAGGATATGGAGATTCCGTTTGTTAGTTTCCTCGAGAAAATGAAGTTGCCGCCTAAGATTAAATCGATTATTTTGTATGCTATAGCCATGCTAGATTATGATCAAGACAATAATGACGTTTGTAAAGAGTTACTTAAAACAAAAGATGGAATAGATTGTTTAGCTCAATACAGCTCATCTGTTGGAAGGTTTCCCAATGCTCCTGGGGCTTTGCTTTATCCTATTTATGGTGAAGGAGAACTACCACAAGCCTTTTGTCGCCGTGCTGCTGTCAAAGGTTGCATTTATGTTCTGAGAATGCCAGTTGTTTCTCTGCTTATGGATAAGGTGCAGATATATATCTTTGATCTGTCTTTGCATCCTGAACAGGTGACATCAATCAAAGCTCTTCAGATAGGATCAAATCTTGCTGTTTGTCCTGCTGGAACCTTTATTTTATACTTTTCCACTTTGTGCAATGATGCCAATGAAGGAAAGAAGCTACTAAAAGCAGCCATGAATGCTCTTCTTACACTGCCTATATCTGGAAACTCTGAAAGTATTGCAAGTGTTCAAAGTGATAGTGAAGATATAAAACCCATTGTGCTCTGGAGTGCATTTTATATTCAGAAATTAATTATGAGTAAATTTGAATTTATCAGCTCCACTCCCACACCGGATGGAAATCTGAACTACAATGACCTTTTAGATGCAACTAAAAAGCTATTTGGTCAGATGTACCCCATTGAAGAATACTTTCCAAAGGCAACATCACCCAAAGATCCTACCGATGAGGATGATAACGTGTTAACTCTGGAGAGCTAA 1437 0.4544 MTQPQEPFSYPPIDPVNFDLIIVGTALSESVIAAAAAAVGKTLLHLDPNSFYGSHFASLSLHDLTSYLNSPHPLPATSAAATTDSDDIVVVDLVHQPLCSDAEIVTYDDSAFLSENSRKFNIDLGGPRALFCADKMIDLLMKSGASQYMEFKGIDESFVYETNGGLANVPDSRGAIFRDKKLSLKEKNQLMRFFKLVQQHLDVTQEEKISEEDMEIPFVSFLEKMKLPPKIKSIILYAIAMLDYDQDNNDVCKELLKTKDGIDCLAQYSSSVGRFPNAPGALLYPIYGEGELPQAFCRRAAVKGCIYVLRMPVVSLLMDKVQIYIFDLSLHPEQVTSIKALQIGSNLAVCPAGTFILYFSTLCNDANEGKKLLKAAMNALLTLPISGNSESIASVQSDSEDIKPIVLWSAFYIQKLIMSKFEFISSTPTPDGNLNYNDLLDATKKLFGQMYPIEEYFPKATSPKDPTDEDDNVLTLES 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1126 478 Pfam GDP dissociation inhibitor 116 320 IPR018203 GO:0005092|GO:0007264
Aed11g1126 478 Pfam GDP dissociation inhibitor 17 70 IPR018203 GO:0005092|GO:0007264
Aed11g1126 478 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 2 94 212 - -
Aed11g1126 478 SUPERFAMILY FAD/NAD(P)-binding domain 16 319 IPR036188 -
Aed11g1126 478 PRINTS Rab GDI/REP protein family signature 19 37 IPR018203 GO:0005092|GO:0007264
Aed11g1126 478 PRINTS Rab GDI/REP protein family signature 186 201 IPR018203 GO:0005092|GO:0007264
Aed11g1126 478 PRINTS Rab GDI/REP protein family signature 288 309 IPR018203 GO:0005092|GO:0007264
Aed11g1126 478 PRINTS Rab GDI/REP protein family signature 136 152 IPR018203 GO:0005092|GO:0007264
Aed11g1126 478 PRINTS Rab GDI/REP protein family signature 37 54 IPR018203 GO:0005092|GO:0007264
Aed11g1126 478 PIRSF Rab_ger_ger_transf_A_euk 321 478 IPR001738 GO:0005968|GO:0006886|GO:0018344
Aed11g1126 478 PIRSF Rab_ger_ger_transf_A_euk 95 324 IPR001738 GO:0005968|GO:0006886|GO:0018344
Aed11g1126 478 PIRSF Rab_ger_ger_transf_A_euk 10 110 IPR001738 GO:0005968|GO:0006886|GO:0018344
Aed11g1126 478 SUPERFAMILY FAD-linked reductases, C-terminal domain 322 414 - -
Aed11g1126 478 PANTHER RAB PROTEINS GERANYLGERANYLTRANSFERASE COMPONENT A 14 320 - -
Aed11g1126 478 PANTHER RAB PROTEINS GERANYLGERANYLTRANSFERASE COMPONENT A 329 464 - -
Aed11g1126 478 Gene3D - 13 81 IPR036188 -
Aed11g1126 478 Gene3D - 236 456 IPR036188 -
Aed11g1126 478 PANTHER RAB GDP-DISSOCIATION INHIBITOR 14 320 IPR018203 GO:0005092|GO:0007264
Aed11g1126 478 PANTHER RAB GDP-DISSOCIATION INHIBITOR 329 464 IPR018203 GO:0005092|GO:0007264
Aed11g1126 478 MobiDBLite consensus disorder prediction 457 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1126 Aed-Chr11 16800163 16807351 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1126 K23460 - gmx:100795946 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1126 11 16800163 16807351 Aed11g1126 11 16800163 16807351 ECH