Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1123 ATGTTCGTGAAGAAGCTTGTCGAGAAAGCATCCATAAAGAAGCCTCTTGTAAATTCATTGGATGGGTTAAAAGCTAGTGATGTAGATCCACGTTTGGTATTTCATCAAGGGGTACCATCTGGTGGTGCCAACTTTGCCTATGACAATATTCAGAAGATACTGGCTCTTTCTACCAAGGATGGACGGATTAAACTATTTGGAAAGGATAATGCCCAAGTCCTACTTGACTCTAAAGAGCCAGTGCCTAGCAAGTTTTTTCAGTTCATTCAGAACCAAGGCATCCTTATAAATGTCACTGTCAATAACCATATTGAGGCAAGTGTTTGGGACATAGACAAAAAACTGTTGTCTGACGTGTACGTTGTTAAGGAAGAAATCACATGTTTCTCAGTCATTCAACATAGCCTCTTTATGTATATTGGATTTTCTAATGGTAATATTTCAGTTTTGATGCTTGATCAAGAACCATGGCATGTGGTACGGATGAAATACAACATACCCCTTTCAGCTTCTTATGGAGATTCAACTGAAGAATCTGATGATACAGTTGTGACACACGTTCTGCCTCAACCAGCAGCCGAGAGTCATAGAGTTCTCATAATCTTTAGAAATGGCCAAATAGTATTATGGGATATTCGAGAAAGCAGATCGATTTTCAGAACTGGTGGAAGAATGTCACAAACACGGTATAATGAAACAAAGAAAGTGTCTTCTGCATGTTGGGTGTGTCCTTTCGGAAGTAAGGTGGTTGTAGGGTACAACAATGGAGAGCTATTCATTTGGAGCATCCCTTCTCTAAACACAGGAAACAGTTTAACAACTGATAATGGTCAAAACACTCCTATGTTCAAATTTAACTTGGGATATAAATCAGACAAAACTTCCATAGGATCAGTAAAATGGATTTGTGCTGAAGGAAAGGCTAGTCGACTATATGTTATGGGAGGTTCTGATTATGCCCCTTCAAACTTGTTGCAGGTAGTGTTGTTGAATGAACATACAGAATCTCGCACAATTAAGATGGGGCTTCATTTGTCAGAAGGCTGTATTGACATGGAGATCATATCAACCTCAAGCAAGAATAGACAAAATTATTTCATTTTGCTTGGAAAATCAGGTCATGTATATCTATATGATGATAATTTGATTGAAAGGTATCTTCTGCAAAGCCAGTCTAAGTCCACTCCTTCACTGCCAAAGGAAGTGATTGTGAAGTTACCATTGACAGATTCAAGTTGCATCACTACATCAAAATTCATCTCCAACAATCCCACTTTGTTCAGTTCTGAAGATGAGTATTACAGTCAGCTGGTCAAGAATTATCCACCGCTTATTCCCATTGAAACAAATCTCAAAGATGGGATTAACTTCAGTTCTGCCAGTTTCACTGGATTTTCAAACATTAAAAACTTGTACATAACTGGACACAGCAATGGAGCCATAAATTTTTGGGATGCGTCATGTCCCTTTTTCACCCCAATTTTGCAATTAAAGCAACAGAGTGAAAATGATTTTTCTTTAAGTGGTATACCCTTGACAGAACTATATTTTGATAGCAACTCTCCGCTCCTTGTTTCTGGTGACCAAAGTGGAATGGTTCGTATCTATAGATTCAAACCTGAACCATATGCCTCCAACAGCTTCATGTCTCTTACTGGTGGTGCAAAGAAAGGAACTGATCATGTAATCCACAGTATGAAACTTGTAAAGACTAGTGGTGCTGTAATTTGTATGAACATAGATCACAGCTCAAGGCATCTTGCTGTTGGTTCTGATCAAGGAAATGTCTCAGTTATTAACATAGATGGACCATCTTTATTATATCGGAAACATATTGCAAGTGAAATTTCAACCGGTATCATCTCTCTGCAGTTCAAAACCTGCAGTTTGCATGGTTTTGAGAAAAACATTTTAGCAGTTGGAACAAAGGACTCGTCTGTTCTAGCACTAGATGGTGAAACTGGAAACTCATTGAGCATTGGAACTATTCATCCTAAGAAGCCCTCTAAAGCTATATTTATGCAGGTGTTGGATGGACAAGGAGAACGAATCACAGGATCAGTTACAAAAGATGGCTTAGAGTTGTACATTTTGCTGTGTTCTGAGAAGGCTTTATATGTCTATTCTTTTGCACATGCTGTACAGGGTGTTAAAAAGGTGCTTTACAAAAAGAAGTTTCATTCCTCTTCCTGTTGCTGGGCATCAACAATTTACAGCCTCTCTGATACTAGTCTCATACTTGTTTTCGCCAGTGGAAAGTTAGAATTAAGGTGGGGATTTTTTCTCAAGTCTTTGCCAGAGTTATCTCTGATGGCAGAGACTTCAATTAGAGGTTTCACTTATTCACCTCCAAAATTGAAGTCATTTTCCGACAGCCAGATATGTTGTTCATCCAAAGGAGATCTTGTTTTGGTGAATGGTGATCAGGAATTTTTTGTTGTCTCATTGTTGGCTAAGAGGAATATTTTCAGGCTTTTGGACTCTGCTAGCTGCATCTACAGGAAGGAAAGGATGCCATCACAAGAAGAGCTTCTTCCTGGCCCTGTAATCCATAAGGAAAAGAAAAAGGGTATATTCAGCTCCGTCATCAAAGATTTTACTAGCAGTAAAGAAAAGCATGCCCCCCTTATGGAAAAAGAAGATCACAAAGAAAGTATTCGAGAACTCTCAGCAGTATTCTCAAATGCAAACTTTGCATGTAATGATAATGTTGATAAGCTGGCGGAAATGGATGAATATCAGCTTGAATTAAACATAGATGACATTGACCTAGATGATCATGAAGAAAAACGCAAAGAACAAAGCATATTGGGAGTCCTTAATAAGAAGAAATTGGCTGGCACATTTCAGTCTCTGAAAGGTTTATTGAAAGAGATGAAGGGAAACAACCAAAAAACATCAGATAAGGAAGGGCAACAGGATGAAAAGGATGGTGCGCTTGATCAAATTAAGAAGAAATATGGATTTTCTTCTTCCTCCAATGAATCAACCATTGCTAAACGGGCACAAATCAAGATGCATGAAAACACAAGGAAACTGCAGGGTACCAACCTTCGTGCCACAGAGATGCAAGATACAGCAAAATCATTTTCATCATTGGCAAAACAAGTGCTGCGAACTACTGAGCAGGATAGACGAAATTGA 3144 0.3865 MFVKKLVEKASIKKPLVNSLDGLKASDVDPRLVFHQGVPSGGANFAYDNIQKILALSTKDGRIKLFGKDNAQVLLDSKEPVPSKFFQFIQNQGILINVTVNNHIEASVWDIDKKLLSDVYVVKEEITCFSVIQHSLFMYIGFSNGNISVLMLDQEPWHVVRMKYNIPLSASYGDSTEESDDTVVTHVLPQPAAESHRVLIIFRNGQIVLWDIRESRSIFRTGGRMSQTRYNETKKVSSACWVCPFGSKVVVGYNNGELFIWSIPSLNTGNSLTTDNGQNTPMFKFNLGYKSDKTSIGSVKWICAEGKASRLYVMGGSDYAPSNLLQVVLLNEHTESRTIKMGLHLSEGCIDMEIISTSSKNRQNYFILLGKSGHVYLYDDNLIERYLLQSQSKSTPSLPKEVIVKLPLTDSSCITTSKFISNNPTLFSSEDEYYSQLVKNYPPLIPIETNLKDGINFSSASFTGFSNIKNLYITGHSNGAINFWDASCPFFTPILQLKQQSENDFSLSGIPLTELYFDSNSPLLVSGDQSGMVRIYRFKPEPYASNSFMSLTGGAKKGTDHVIHSMKLVKTSGAVICMNIDHSSRHLAVGSDQGNVSVINIDGPSLLYRKHIASEISTGIISLQFKTCSLHGFEKNILAVGTKDSSVLALDGETGNSLSIGTIHPKKPSKAIFMQVLDGQGERITGSVTKDGLELYILLCSEKALYVYSFAHAVQGVKKVLYKKKFHSSSCCWASTIYSLSDTSLILVFASGKLELRWGFFLKSLPELSLMAETSIRGFTYSPPKLKSFSDSQICCSSKGDLVLVNGDQEFFVVSLLAKRNIFRLLDSASCIYRKERMPSQEELLPGPVIHKEKKKGIFSSVIKDFTSSKEKHAPLMEKEDHKESIRELSAVFSNANFACNDNVDKLAEMDEYQLELNIDDIDLDDHEEKRKEQSILGVLNKKKLAGTFQSLKGLLKEMKGNNQKTSDKEGQQDEKDGALDQIKKKYGFSSSSNESTIAKRAQIKMHENTRKLQGTNLRATEMQDTAKSFSSLAKQVLRTTEQDRRN 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1123 1047 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 1 1046 - -
Aed11g1123 1047 SMART WD40_4 222 262 IPR001680 GO:0005515
Aed11g1123 1047 SMART WD40_4 559 600 IPR001680 GO:0005515
Aed11g1123 1047 SMART WD40_4 498 537 IPR001680 GO:0005515
Aed11g1123 1047 CDD R-SNARE_STXBP5_6 982 1042 - -
Aed11g1123 1047 Gene3D - 445 685 IPR015943 GO:0005515
Aed11g1123 1047 Coils Coil 910 930 - -
Aed11g1123 1047 MobiDBLite consensus disorder prediction 991 1047 - -
Aed11g1123 1047 PANTHER TRANSDUCIN/WD40 REPEAT PROTEIN 1 1046 - -
Aed11g1123 1047 SUPERFAMILY WD40 repeat-like 45 430 IPR036322 GO:0005515
Aed11g1123 1047 SUPERFAMILY WD40 repeat-like 570 799 IPR036322 GO:0005515
Aed11g1123 1047 SUPERFAMILY WD40 repeat-like 51 648 IPR036322 GO:0005515
Aed11g1123 1047 MobiDBLite consensus disorder prediction 1009 1038 - -
Aed11g1123 1047 Gene3D - 44 431 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1123 Aed-Chr11 16777430 16785396 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1123 - - gmx:100782049 1861.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1123 11 16777430 16785396 Aed11g1123 11 16777430 16785396 ECH
Aed11g1123 11 16777430 16785396 Aed7g1293 7 10628445 10639769 PCT