Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1101 ATGAAATTTAGAATCTGCCCTAATCATCATAACTGGAAGAACCTCTTCACGAAGGCGCGAAACTTGATCAGTGTTAGACGCGCTTCCGCCGCCGCCGCAATGGGTGACGTTCAGATCCACAAGACTAAAGTCTGCATCATCGGAAGCGGTCCCTCCGCCCACACCGCCGCCGTGTACGCCGCCCGCGCGGAGCTGAAGCCGATCCTCTTCGAGGGCTGGATGGCCAACGACATCGCCCCCGGCGGGCAGCTCACCACCACTACCGACGTCGAGAACTTCCCCGGCTTCCCCGACGGCATCCTCGGCGGCGAGCTCATGGACCGCTGCCGGAGCCAGTCCGTCCGCTTCGGCACCAAGATCCACACCGAGACCGTCTCCAAGGTCGATTTCTCCGCCCGTCCTTTTAGGGTTTTCACCGATTCCCGCACCGTCGAGGCCGAATCTGTCATCGTCGCCACCGGCGCCGTCGCCAAGCGCCTCCCCTTCCCCGGCTCCGGCGACGGCCCTGACGGCTACTGGAACCGCGGCATCTCGGCGTGCGCCGTCTGCGATGGCGCCGCCCCGATCTTCCGGAACAAGGCGCTGGCGGTGATCGGCGGAGGGGACTCCGCCATGGAGGAAGCCACCTTCCTCACGAAGTACGGTTCGGAGGTTTACATAATTCACCGGAGGGACACGTTCAGGGCTTCGAAGATTATGCAGAGCAAGGTGATGAGTAATAGCAAGATAAAGGTGATTTGGAATTCGACGGTGGTGGAGGCCTATGGGACCGGAGAGAACAACAGGGTGCTTGGGGGATTGAAGGTGAAGAATGTGGTGACTCAAGAGGTGTCTGATTTGAAGGTTAATGGGTTGTTTTTCGCAATTGGGCACGAGCCTGCGACCAAGTTCTTGGACGGGCAGCTTGAACTGGATTCTGATGGATACATTGTGACCAAGCCGGGGACCACCAAGACCAGTGTCGAGGGAGTGTTTGCCGCTGGGGATGTTCAGGACAAGAAGTATAGGCAAGCTATCACTGCTGCTGGCACTGGATGCATGGCAGCTTTGGATGCAGAACATTACCTGCAAAATGTTGGTTTACAACAAGATAAGAGTGATTGA 1104 0.5797 MKFRICPNHHNWKNLFTKARNLISVRRASAAAAMGDVQIHKTKVCIIGSGPSAHTAAVYAARAELKPILFEGWMANDIAPGGQLTTTTDVENFPGFPDGILGGELMDRCRSQSVRFGTKIHTETVSKVDFSARPFRVFTDSRTVEAESVIVATGAVAKRLPFPGSGDGPDGYWNRGISACAVCDGAAPIFRNKALAVIGGGDSAMEEATFLTKYGSEVYIIHRRDTFRASKIMQSKVMSNSKIKVIWNSTVVEAYGTGENNRVLGGLKVKNVVTQEVSDLKVNGLFFAIGHEPATKFLDGQLELDSDGYIVTKPGTTKTSVEGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHYLQNVGLQQDKSD 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1101 367 Pfam Pyridine nucleotide-disulphide oxidoreductase 43 344 IPR023753 GO:0016491
Aed11g1101 367 PRINTS Pyridine nucleotide disulphide reductase class-II signature 147 155 - -
Aed11g1101 367 PRINTS Pyridine nucleotide disulphide reductase class-II signature 242 258 - -
Aed11g1101 367 PRINTS Pyridine nucleotide disulphide reductase class-II signature 190 214 - -
Aed11g1101 367 PRINTS Pyridine nucleotide disulphide reductase class-II signature 173 185 - -
Aed11g1101 367 PRINTS Pyridine nucleotide disulphide reductase class-II signature 284 305 - -
Aed11g1101 367 PRINTS Pyridine nucleotide disulphide reductase class-II signature 102 112 - -
Aed11g1101 367 PRINTS Pyridine nucleotide disulphide reductase class-II signature 81 96 - -
Aed11g1101 367 PRINTS Pyridine nucleotide disulphide reductase class-II signature 43 65 - -
Aed11g1101 367 PRINTS Pyridine nucleotide disulphide reductase class-II signature 319 337 - -
Aed11g1101 367 Gene3D - 162 294 IPR036188 -
Aed11g1101 367 PANTHER THIOREDOXIN REDUCTASE 39 363 - -
Aed11g1101 367 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-II active site. 180 202 IPR008255 GO:0016491
Aed11g1101 367 PRINTS FAD-dependent pyridine nucleotide reductase signature 194 212 - -
Aed11g1101 367 PRINTS FAD-dependent pyridine nucleotide reductase signature 309 331 - -
Aed11g1101 367 PRINTS FAD-dependent pyridine nucleotide reductase signature 282 298 - -
Aed11g1101 367 PRINTS FAD-dependent pyridine nucleotide reductase signature 146 164 - -
Aed11g1101 367 PRINTS FAD-dependent pyridine nucleotide reductase signature 44 63 - -
Aed11g1101 367 SUPERFAMILY FAD/NAD(P)-binding domain 40 356 IPR036188 -
Aed11g1101 367 PANTHER THIOREDOXIN REDUCTASE 1-RELATED-RELATED 39 363 - -
Aed11g1101 367 TIGRFAM TRX_reduct: thioredoxin-disulfide reductase 43 356 IPR005982 GO:0004791|GO:0005737|GO:0019430
Aed11g1101 367 Gene3D - 46 355 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1101 Aed-Chr11 16609900 16615221 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1101 K00384 - gmx:100786086 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1101 11 16609900 16615221 Aed11g1101 11 16609900 16615221 ECH
Aed11g1101 11 16609900 16615221 Aed7g1317 7 10915026 10919066 PCT