Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1088 ATGGTCCCCAAACCAATCTTAGTCACGACACCACCGGTGTCTTCTGCACCCACTCCACCCTTACCTCTCTTCAACGCAGTTTCACCCGTTAGAACACAAGAAAAACCCCTAACACAAACCACCACCACCATTCAGCAAAAAGTTATAACCAAACCAAGCCCTTCCACCACCAAGACGACGCCGCCGCCGCCGCAGCAGCAGCGCGTTGAAGTAAAAAGAAAAACAAAACCAAACTCATGGGTTCCCGCACTAATGCTCAACGCATTCGACGACATCATCAACAACTTCATAGACCCTCCACTCAAACCCTCCATCGACCCACGCCACGTGTTGTCGCAAAACTTCTCTCCCGTCGACGAGCTCCCTCCCACGGAGTGCGAAATCATACACGGCTCTCTCCCGCCGTGCCTCGACGGCGCGTACATCCGAAACGGCCCCAACCCTCAGTTCCTCCCGCGTGGGCCCTACCACCTCTTCGACGGAGACGGCATGCTCCACGCGCTTCGTATCTCCCGAGGCAAACCCACCCTCTGCAGCCGCTACGTCAAAACCTACAAATACACACTCGAAAAGGACGCCGGGTTCCCTCTCATCCCCAACGTGTTCTCCGGCTTCAACTCCCTCGTGGCCTCAGCGGCACGTGGCTCCCTCTCCGCGGCACGTGTCTTAACGGGACAGTTCAACCCCGCTAACGGCATTGGGTTGGCCAACACAAGCTTATCCTTCTTCGGCAACCGACTCTTCGCGCTGGGCGAATCCGACCTTCCTTACGTCGTTAACGTGACCCCAGACGGCGACATTGAAACCCTCGGCCGTCACGACTTTGACGGCAAACTCACGTTCAGCATGACGGCCCACCCTAAGATAGACCCCGACACAGGGGAATGCTTCGCATTCCGTTACGGTCCGGTGCCGCCGTTCCTCACCTACTTCCGTTTCGACCCTAACGGGAAAAAACACCAAGATGTGCCTATTTTCTCTATGCTAACACCTTCGTTCCTTCACGATTTCGCCATTACGAAGAATCACGTGATCTTCTGCGATATTCAGCTCGGAATGAATCCTCTCGACATGATCGCCGGTGGCTCCCCCGTCGGCTCCGACGCCTCCAAGGTCCCACGGATCGGAATCCTTCCTCGTGATGCTAAGGATGAATCGAAGATGAAATGGTTTGACGTGCCGGGGTTCAACAACATTCACGCGATAAACGCGTGGGAGGAGGACGAGGGAAGAACGGTGGTTCTGCTGGCGCCGAATATTCTGTCGGTGGAGCATGCGCTGGAGAGGACGGATTTAGTTCACGCGATGGTGGAGAAGGTGAGGATCGAGCTTGACACGGGGATAATCACGAGGCAACCGGTATCGGCGCGGAACCTCGATTTCGCGGTTATAAATCCGGTGTTCGTTGGGAAGAAGAACAGGTTCGTGTACGCCGCGGTGGGGGATCCAATGCCGAAGATATCTGGGGTGGTGAAGCTGGACGTGTCGAAGGGGGAGGAGCGGAGGGACTGCACCGTCGGGTGCAGGATGTACGGCGAGGGTTGCTACGGCGGGGAACCGTTCTTCGTGGCGAGGGAGGAGGGGGGCGAGGAAGATGATGGGTACTTGGTGACGTACGTGCACGATGAGAGGAAGGGAGAGTCGACGTTTTTGGTGATGGATGCGAAGTCCCCGGAGCTGGATGTTGTGGCGGCGGTGAGGCTTCCACGGCGGGTGCCGTACGGGTTCCATGGGCTGTTTGTGAAGGAGAGTGAGCTCAGGAAAGTGTCCTTGTCATTGTAG 1782 0.5673 MVPKPILVTTPPVSSAPTPPLPLFNAVSPVRTQEKPLTQTTTTIQQKVITKPSPSTTKTTPPPPQQQRVEVKRKTKPNSWVPALMLNAFDDIINNFIDPPLKPSIDPRHVLSQNFSPVDELPPTECEIIHGSLPPCLDGAYIRNGPNPQFLPRGPYHLFDGDGMLHALRISRGKPTLCSRYVKTYKYTLEKDAGFPLIPNVFSGFNSLVASAARGSLSAARVLTGQFNPANGIGLANTSLSFFGNRLFALGESDLPYVVNVTPDGDIETLGRHDFDGKLTFSMTAHPKIDPDTGECFAFRYGPVPPFLTYFRFDPNGKKHQDVPIFSMLTPSFLHDFAITKNHVIFCDIQLGMNPLDMIAGGSPVGSDASKVPRIGILPRDAKDESKMKWFDVPGFNNIHAINAWEEDEGRTVVLLAPNILSVEHALERTDLVHAMVEKVRIELDTGIITRQPVSARNLDFAVINPVFVGKKNRFVYAAVGDPMPKISGVVKLDVSKGEERRDCTVGCRMYGEGCYGGEPFFVAREEGGEEDDGYLVTYVHDERKGESTFLVMDAKSPELDVVAAVRLPRRVPYGFHGLFVKESELRKVSLSL 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1088 593 Pfam Retinal pigment epithelial membrane protein 118 582 IPR004294 GO:0016702
Aed11g1088 593 MobiDBLite consensus disorder prediction 32 55 - -
Aed11g1088 593 PANTHER BETA-CAROTENE DIOXYGENASE 27 588 IPR004294 GO:0016702
Aed11g1088 593 MobiDBLite consensus disorder prediction 1 20 - -
Aed11g1088 593 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE 4, CHLOROPLASTIC-RELATED 27 588 - -
Aed11g1088 593 MobiDBLite consensus disorder prediction 32 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1088 Aed-Chr11 16528946 16531424 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1088 K09840 - gmx:100777875 1019.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1088 11 16528946 16531424 Aed11g1088 11 16528946 16531424 ECH