Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1072 ATGGGGTCCAGCCAGGGGCAGTCGAAGGAGTTCGTGGAACTAATAAAGTCCATCGGCGAGGCCCGATCGAAGGCGGAGGAGGACCGCATCGTCCTCGGCGAGATCGAAACCCTTAAGCGCCGCATCAACAACTCCGACGTCACACAGCTGAAGATGAAGGAGTACATCCTCCGGCTCCTCTACGTGGAGATGCTCGGCCACGACGCTTCATTCGGATACATCCACGCCGTCAACATCACTCACCACCACTCTCTCCTCCTCAAGCGCACCGGCTACCTCGCCCTCACTCTCTTCCTCTCCGACCGCCACGACCTCATCATCCTCATCGTCAACACCATCCACAAGGACCTCGCCTCCGACAACTACCTCGTCGTCTGCGCCGCGCTCAACGCTGCCTGCAGGCTCATCAACGAGGACACCATCCCCGCCGTGCTCCCTCGTGTCGTCGATTTGCTCAACCACTCCAAGGACGCCGTTAGGAAAAAAGCCGTTATGGCTCTTCACCGGTTTTACCAGAAATCTCCGTCATCCGTTTCTCATTTGCTTTCTAATTTTCGCAAGCGCTTGTGCGATAATGACCCTGGAGTAATGGGCGCTTCTCTCTGCCCTCTTTTTAATCTCGTTTCCGATGATGTTAACTCTTACAAGGACCTCGTCGTTAGTTTTGTTAATATTCTCAAACAAGTCGCAGAACGCAGATTGCCGAAAACCTATGATTATCACCAAATGCCTGCACCCTTCATCCAGATTAAGTTGCTGAAAATTCTTGCATTGCTGGGAAGTGGCGACAAGCAGGCTAGTGGACACATGTACACTGTGCTTGGGGATATAATTAGGAAGAGTGATTCGATGACCAACATAGGGAATGCTGTTCTCTATCAGTGCATATGCTGTGTGGCTTCTATATATCCCAATTCTAACTTATTAGATGCTGCTGCGGATGTCATTGCAAAATTTTTGAAGAGTGACAGTCATAACCTGAAGTACATGGGCATTGATGCCCTTGGTCGGTTGATAAAGTTAAGCCCACATATTGCAGAACAACACCAACTGGCCGTCATTGACTGCTTGGAGGACCCTGATGATAGTCTAAAACGAAAAACATTTGAACTGTTATACAAAATGACCAAGTCTTCCAATGTGGAAGTGATTGTTGACAGAATGATTGATTACATGATTAGCATAAGTGATGACCATCATAAAACCTATATAGCATCCCGATGTGTGGAACTTGCTGAGCAATTTGCACCAAGTAATAATTGGTTTATACAGACAATGAATAAAGTTTTTGAGCATGCTGGAGATCTTGTTAATATTAAGGTGGCACATAATTTGATGCGGTTGATTGCTGAAGGATTTGGAGAGGACGATGATGCTGCAGAGTTGAGATCATCTGCTGTTGAGTCATATTTGCGCATTATTGGAGAGCCAAAGCTTCCATCTGTGTTTCTTCAAGTCATCTGTTGGGTTCTTGGGGAATATGGAACAATGGATGGAAAGTATTCTGCTTCCTATATCAGTGGGAAGTTATGTGACATTGCTGTGGCATGTTCTGATGATGAAAATGTCAAGGCTTATGCAATTTCAGCATTGATGAAAATTTATGCATTTGAAGTAGCAGATGGGAGGAAAGTGGATATCCTATCTGAGTGCCAATCTTTGATTGAAGAATTATTAGCATCCCACTCTACAGATTTGCAGCAACGTGCTTATGAATTTCAAGCCCTTATAGGTTTGGATGCAAAAGCTGTTGAAACAATAATGCCACAAGATGCAAGTTGTGAAGACATTGAGGTTGATAAGAATCTTTATTTCCTCAATGGGTATGTTCAGCAGTCTCTTGAAAGGGGTGCTCAATCCTATATTCCTGAGGATGTGCGCACTGGATTGGGGAATACGAACAAATTCAGAAGCCCGGATCATCATGAATCTTTTCAGCATGGTCTAAGATTTGAGGCATATGAAGTTCCAAAGCCTCCAATTACTCCAGTTTCATTTGCATCCTCAGCAGACATTGTTCCAGTACCTGAGGCATTGTCTTCCAGGGAGACCCACCATATCTCATCAGTGGGATCAACATCAGAGACTGGATCATCAGAGCTTAAGCTACGGCTTGATGGTGTTCAGAAGAAGTGGGGTAGGCCAACTCATTCGTCTCCAAGTCCAACATCACCATCCTCTTCCCAAAAGCCAACAAATGGGGCAACTCGGGTGGATGGTGCTACAGCTGTCAATTCAAAAGTACACGACAGTTATGATTCGAGAAAGACACAGGTTGAGATTACTCCAGAAAAGCAAAAGCTTGCTGCTTCATTGTTTGGTGGTTCAACTAAACCTGAAAAAAGATCATCTACAAGTCATAAGGTTCCGAAATCTAGTGCTAGTGCTGCAGACGTTTCTCAGGGATCAAAAGCTGCAGTTGTAACTAATGAAGTAGCTGTGGAAAAAACAATTCACCAACCACTTCCTGATTTGCTTGACTTGGGTGAACCAGCTATCACTACAGCTCCTCCTTCTGTGGACCCATTCAAGGAATTAGAAGGACTTCTTGACCCAAGCACTAATCCTGCAACCAATCATAATGTAGGTGCTGCTACAAATGCCCCTGATATTATGTCACTCTATGCAGAGACTACTGCCAGTGGTGGCTATTCTATACCTGTGAGTGGAGGGTATGATGTAAATCTTTTATCTGAATTGTCAAATGCAGCTGTAAAAGCTACTAGTGGAGAAACAATTGTGTCGCCTTTGCCCCAATCTATTAAGGGTCCAAATGCTAAAGATTTTATGGATAAGGATGCACTAGTGAGGCAGATAGGTGTGAACCCCTCAAGTCAGAATCCTAACTTGTTCAGCGACTTGTTTGGCTAA 2871 0.449 MGSSQGQSKEFVELIKSIGEARSKAEEDRIVLGEIETLKRRINNSDVTQLKMKEYILRLLYVEMLGHDASFGYIHAVNITHHHSLLLKRTGYLALTLFLSDRHDLIILIVNTIHKDLASDNYLVVCAALNAACRLINEDTIPAVLPRVVDLLNHSKDAVRKKAVMALHRFYQKSPSSVSHLLSNFRKRLCDNDPGVMGASLCPLFNLVSDDVNSYKDLVVSFVNILKQVAERRLPKTYDYHQMPAPFIQIKLLKILALLGSGDKQASGHMYTVLGDIIRKSDSMTNIGNAVLYQCICCVASIYPNSNLLDAAADVIAKFLKSDSHNLKYMGIDALGRLIKLSPHIAEQHQLAVIDCLEDPDDSLKRKTFELLYKMTKSSNVEVIVDRMIDYMISISDDHHKTYIASRCVELAEQFAPSNNWFIQTMNKVFEHAGDLVNIKVAHNLMRLIAEGFGEDDDAAELRSSAVESYLRIIGEPKLPSVFLQVICWVLGEYGTMDGKYSASYISGKLCDIAVACSDDENVKAYAISALMKIYAFEVADGRKVDILSECQSLIEELLASHSTDLQQRAYEFQALIGLDAKAVETIMPQDASCEDIEVDKNLYFLNGYVQQSLERGAQSYIPEDVRTGLGNTNKFRSPDHHESFQHGLRFEAYEVPKPPITPVSFASSADIVPVPEALSSRETHHISSVGSTSETGSSELKLRLDGVQKKWGRPTHSSPSPTSPSSSQKPTNGATRVDGATAVNSKVHDSYDSRKTQVEITPEKQKLAASLFGGSTKPEKRSSTSHKVPKSSASAADVSQGSKAAVVTNEVAVEKTIHQPLPDLLDLGEPAITTAPPSVDPFKELEGLLDPSTNPATNHNVGAATNAPDIMSLYAETTASGGYSIPVSGGYDVNLLSELSNAAVKATSGETIVSPLPQSIKGPNAKDFMDKDALVRQIGVNPSSQNPNLFSDLFG 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1072 956 SUPERFAMILY ARM repeat 25 602 IPR016024 -
Aed11g1072 956 PANTHER AP-4 COMPLEX SUBUNIT EPSILON-1 4 952 - -
Aed11g1072 956 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 4 952 - -
Aed11g1072 956 MobiDBLite consensus disorder prediction 682 700 - -
Aed11g1072 956 MobiDBLite consensus disorder prediction 680 798 - -
Aed11g1072 956 Pfam Adaptin N terminal region 44 578 IPR002553 GO:0006886|GO:0016192|GO:0030117
Aed11g1072 956 Gene3D - 2 590 IPR011989 -
Aed11g1072 956 PIRSF AP4_epsilon 1 658 IPR017109 GO:0015031|GO:0030124
Aed11g1072 956 PIRSF AP4_epsilon 897 956 IPR017109 GO:0015031|GO:0030124
Aed11g1072 956 PIRSF AP4_epsilon 680 821 IPR017109 GO:0015031|GO:0030124
Aed11g1072 956 MobiDBLite consensus disorder prediction 714 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1072 Aed-Chr11 16392234 16399480 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1072 K12400 - gmx:100819573 1655.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1072 11 16392234 16399480 Aed11g1072 11 16392234 16399480 ECH